myRT

myRT report for GCA_014697575.1_ASM1469757v1

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Seq: JACJSC010000053.1 (20934 bp)
Overview 1 RT 1: 3-3841 bp Neighborhood of RT #1 [3, 3858] RVT_N RVT-GII Uup ABC_tran_CTD Feature: gene Location: 3-1130 bp Feature: domain Description: RVT_N Location: 39-285 bp Feature: domain Description: RVT_N Location: 39-285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 327-993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 327-993 bp Feature: gene Location: 1363-1704 bp Feature: gene Location: 1918-3858 bp Feature: domain Description: Uup Location: 1921-3526 bp Feature: domain Description: Uup Location: 1 921 -3526 bp Feature: domain Description: ABC_tran_CTD Location: 3640-3841 bp Feature: domain Description: ABC_tran_CTD Location: 3640-3841 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, Uup (COG0488), ABC_tran_CTD (pfam16326)

Seq: JACJSC010000033.1 (61049 bp)
Overview 1 RT 1: 5297-10365 bp Neighborhood of RT #1 [5297, 10365] PulO RVT_N RVT-GII GIIM HNHc accD Feature: gene Location: 5297-6118 bp Feature: domain Description: PulO Location: 5333-6089 bp Feature: domain Description: PulO Location: 5333-6089 bp Feature: gene Location: 6174-6395 bp Feature: gene Location: 6512-8230 bp Feature: domain Description: RVT_N Location: 6557-6803 bp Feature: domain Description: RVT_N Location: 6557-6803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6845-7511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6845-7511 bp Feature: domain Description: GIIM Note: maturase Location: 7610-7838 bp Feature: domain Description: GIIM Note: maturase Location: 7610-7838 bp Feature: domain Description: HNHc Note: nucleases Location: 8024-8186 bp Feature: domain Description: HNHc Note: nucleases Location: 802 4-8186 bp Feature: gene Location: 9038-10000 bp Feature: domain Description: accD Location: 9098-9890 bp Feature: domain Description: accD Location: 9098-9890 bp Feature: gene Location: 10162-10365 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PulO (COG1989), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), accD (TIGR00515)

Seq: JACJSC010000036.1 (55916 bp)
Overview 1 RT 1: 5895-9103 bp Neighborhood of RT #1 [5895, 9117] Avd_like RVT-DGRs Uma2 rps10 Feature: gene Location: 5895-6104 bp Feature: gene Location: 6149-6505 bp Feature: domain Description: Avd_like Location: 6173-6479 bp Feature: domain Description: Avd_like Location: 6173 -6479 bp Feature: gene Location: 6502-7560 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6706-7354 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6706-73 54 bp Feature: gene Location: 7964-8566 bp Feature: domain Description: Uma2 Location: 7997-8549 bp Feature: domain Description: Uma2 Location: 7997-8549 bp Feature: gene Location: 8800-9117 bp Feature: domain Description: rps10 Location: 8806-9103 bp Feature: domain Description: rps10 Location: 8806-9103 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, Uma2 (pfam05685), rps10 (CHL00135)