myRT

myRT report for GCA_014698045.1_ASM1469804v1

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Seq: JACJSE010000045.1 (39374 bp)
Overview 1 RT 1: 24010-33141 bp Neighborhood of RT #1 [24010, 33197] Cas2_I_II_III Cas_Cas1 RVT-CRISPR cas1 HTH_XRE DUF4384 TPR_12 TPR_12 TPR_10 TPR_12 TPR_12 TPR_12 TPR_12 CHAT Feature: gene Location: 24010-24204 bp Feature: domain Description: Cas2_I_II_III Location: 24013-24166 bp Feature: domain Description: Cas2_I_II_III Location: 2401 3-241 66 bp Feature: gene Location: 24288-25328 bp Feature: domain Description: Cas_Cas1 Location: 24300-25041 bp Feature: domain Description: Cas_Cas1 Location: 24300-25041 bp Feature: gene Location: 26394-28406 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 26583-27189 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 26583-271 89 bp Feature: domain Description: cas1 Location: 27411-28377 bp Feature: domain Description: cas1 Location: 2741 1 -28377 bp Feature: gene Location: 28573-29397 bp Feature: domain Description: HTH_XRE Location: 28681-28840 bp Feature: domain Description: HTH_XRE Location: 28681 -28840 bp Feature: domain Description: DUF4384 Location: 29026-29257 bp Feature: domain Description: DUF4384 Location: 29026-29257 bp Feature: gene Location: 29412-33197 bp Feature: domain Description: TPR_12 Location: 29565-29778 bp Feature: domain Description: TPR_1 2 Location: 29565-29778 bp Feature: domain Description: TPR_12 Location: 29814-30036 bp Feature: domain Description: TPR_1 2 Location: 2981 4-30036 bp Feature: domain Description: TPR_10 Location: 30069-30186 bp Feature: domain Description: TPR_1 0 Location: 30069-301 86 bp Feature: domain Description: TPR_12 Location: 30192-30414 bp Feature: domain Description: TPR_1 2 Location: 301 92-3041 4 bp Feature: domain Description: TPR_12 Location: 30441-30666 bp Feature: domain Description: TPR_1 2 Location: 30441 -30666 bp Feature: domain Description: TPR_12 Location: 30696-30918 bp Feature: domain Description: TPR_1 2 Location: 30696-3091 8 bp Feature: domain Description: TPR_12 Location: 30948-31170 bp Feature: domain Description: TPR_1 2 Location: 30948-31 1 70 bp Feature: domain Description: CHAT Location: 32037-33141 bp Feature: domain Description: CHAT Location: 32037-331 41 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), Cas_Cas1 (pfam01867), RVT-CRISPR, cas1 (TIGR00287), HTH_XRE (smart00530), DUF4384 (pfam14326), TPR_12 (pfam13424), TPR_10 (pfam13374), CHAT (pfam12770)

Seq: JACJSE010000005.1 (519109 bp)
Overview 1 RT 1: 399339-407652 bp Neighborhood of RT #1 [399339, 407825] RVT-Retrons DUF3854 Lactamase_B_3 Feature: gene Location: 399339-400283 bp Feature: gene Location: 400798-401013 bp Feature: gene Location: 401280-402320 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 401463-402075 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 401463-402 075 bp Feature: gene Location: 403765-406869 bp Feature: domain Description: DUF3854 Location: 404221-404593 bp Feature: domain Description: DUF3854 Location: 4042 2 1-404593 bp Feature: gene Location: 407049-407825 bp Feature: domain Description: Lactamase_B_3 Location: 407055-407652 bp Feature: domain Description: Lactamase_B_3 Location: 407055-407652 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, DUF3854 (pfam12965), Lactamase_B_3 (pfam13483)

Seq: JACJSE010000016.1 (144002 bp)
Overview 1 RT 1: 130104-134855 bp Neighborhood of RT #1 [130104, 134875] NifT TRX_Fd_family RVT-UG12 YeaD2 ftrB Feature: gene Location: 130104-130307 bp Feature: domain Description: NifT Location: 130107-130302 bp Feature: domain Description: NifT Location: 13 0107-13 03 02 bp Feature: gene Location: 130522-131061 bp Feature: domain Description: TRX_Fd_family Location: 130828-131053 bp Feature: domain Description: TRX_Fd_family Location: 13 0828-13 1053 bp Feature: gene Location: 131398-132969 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 131755-132196 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 13 1755-13 2196 bp Feature: gene Location: 133154-134344 bp Feature: domain Description: YeaD2 Location: 133196-134189 bp Feature: domain Description: YeaD2 Location: 13 3 196-13 4189 bp Feature: gene Location: 134510-134875 bp Feature: domain Description: ftrB Location: 134531-134855 bp Feature: domain Description: ftrB Location: 13 453 1-13 4855 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NifT (pfam06988), TRX_Fd_family (cd02980), RVT-UG12, YeaD2 (COG1721), ftrB (PRK09392)

Seq: JACJSE010000031.1 (78905 bp)
Overview 1 RT 1: 69840-74918 bp Neighborhood of RT #1 [69840, 74918] HTH_XRE DUF4384 RVT-CRISPR cas1 Feature: gene Location: 69840-70670 bp Feature: domain Description: HTH_XRE Location: 69975-70122 bp Feature: domain Description: HTH_XRE Location: 69975-70122 bp Feature: domain Description: DUF4384 Location: 70296-70527 bp Feature: domain Description: DUF4 384 Location: 70296-70527 bp Feature: gene Location: 70870-71148 bp Feature: gene Location: 71429-73447 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 71615-72224 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 71615-72224 bp Feature: domain Description: cas1 Location: 72440-73418 bp Feature: domain Description: cas1 Location: 724 4 0-734 18 bp Feature: gene Location: 74320-74673 bp Feature: gene Location: 74724-74918 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), DUF4384 (pfam14326), RVT-CRISPR, cas1 (TIGR00287)