myRT

myRT report for GCA_014698065.1_ASM1469806v1

Download annotations/find similar RTs

Seq: JACJSI010000398.1 (5270 bp)
Overview 1 RT 1: 655-2975 bp Neighborhood of RT #1 [655, 2975] RVT_N RVT-GII RVT-GII GIIM McrA Feature: gene Location: 655-1137 bp Feature: domain Description: RVT_N Location: 703-937 bp Feature: domain Description: RVT_N Location: 703-937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1000-1099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 000-1 099 bp Feature: gene Location: 1266-2243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1287-1656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 287-1 656 bp Feature: domain Description: GIIM Note: maturase Location: 1713-1878 bp Feature: domain Description: GIIM Note: maturase Location: 1 71 3-1 878 bp Feature: domain Description: McrA Location: 1890-2232 bp Feature: domain Description: McrA Location: 1 890-2232 bp Feature: gene Location: 2551-2712 bp Feature: gene Location: 2796-2975 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACJSI010000010.1 (156901 bp)
Overview 1 RT 1: 84409-90068 bp Neighborhood of RT #1 [84409, 90082] Ndh DREG-2 RVT_N RVT-GII McrA Tab2_like Feature: gene Location: 84409-85602 bp Feature: domain Description: Ndh Location: 84427-85591 bp Feature: domain Description: Ndh Location: 8442 7-85591 bp Feature: gene Location: 85759-86406 bp Feature: domain Description: DREG-2 Location: 85774-86389 bp Feature: domain Description: DREG-2 Location: 85774-86389 bp Feature: gene Location: 87255-88835 bp Feature: domain Description: RVT_N Location: 87291-87531 bp Feature: domain Description: RVT_N Location: 872 91-87531 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87588-88251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87588-882 51 bp Feature: domain Description: McrA Location: 88482-88812 bp Feature: domain Description: McrA Location: 88482 -88812 bp Feature: gene Location: 88889-89176 bp Feature: gene Location: 89222-90082 bp Feature: domain Description: Tab2_like Location: 89237-90068 bp Feature: domain Description: Tab2 _like Location: 892 37-90068 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACJSI010000266.1 (8147 bp)
Overview 1 RT 1: 1460-5845 bp Neighborhood of RT #1 [1460, 5845] RVT_N RVT-GII McrA Feature: gene Location: 1460-1612 bp Feature: gene Location: 1936-2118 bp Feature: gene Location: 2123-3679 bp Feature: domain Description: RVT_N Location: 2159-2399 bp Feature: domain Description: RVT_N Location: 2159-23 99 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2456-3092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2456-3 092 bp Feature: domain Description: McrA Location: 3326-3647 bp Feature: domain Description: McrA Location: 3 3 26-3 647 bp Feature: gene Location: 3778-5544 bp Feature: gene Location: 5639-5845 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACJSI010000177.1 (12488 bp)
Overview 1 RT 1: 2-3553 bp Neighborhood of RT #1 [2, 3553] RVT_N RVT-GII GIIM McrA Feature: gene Location: 2-754 bp Feature: gene Location: 1312-2880 bp Feature: domain Description: RVT_N Location: 1348-1582 bp Feature: domain Description: RVT_N Location: 134 8-1582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1639-2293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1639-2293 bp Feature: domain Description: GIIM Note: maturase Location: 2350-2548 bp Feature: domain Description: GIIM Note: maturase Location: 2350-254 8 bp Feature: domain Description: McrA Location: 2554-2848 bp Feature: domain Description: McrA Location: 2554 -284 8 bp Feature: gene Location: 3081-3254 bp Feature: gene Location: 3287-3553 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACJSI010000562.1 (3110 bp)
Overview 1 RT 1: 98-2997 bp Neighborhood of RT #1 [98, 3014] COG2263 RVT_N RVT-GII Feature: gene Location: 98-1198 bp Feature: domain Description: COG2263 Location: 434-761 bp Feature: domain Description: COG2263 Location: 434-761 bp Feature: gene Location: 1431-1589 bp Feature: gene Location: 2139-3014 bp Feature: domain Description: RVT_N Location: 2175-2415 bp Feature: domain Description: RVT_N Location: 2175 -2415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2472-2997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2472-2997 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACJSI010000052.1 (48683 bp)
Overview 1 RT 1: 7001-13618 bp Neighborhood of RT #1 [7001, 13618] phytoene_desat BglX RVT_N RVT-GII McrA CE4_NodB_like_6s_7s Feature: gene Location: 7001-8440 bp Feature: domain Description: phytoene_desat Location: 7007-8360 bp Feature: domain Description: phytoene_desat Location: 7007-836 0 bp Feature: gene Location: 8886-9986 bp Feature: domain Description: BglX Location: 8928-9888 bp Feature: domain Description: BglX Location: 8928-9888 bp Feature: gene Location: 10314-12110 bp Feature: domain Description: RVT_N Location: 10566-10806 bp Feature: domain Description: RVT_N Location: 1056 6 -10806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10863-11526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1086 3-11526 bp Feature: domain Description: McrA Location: 11757-12087 bp Feature: domain Description: McrA Location: 11757-12087 bp Feature: gene Location: 12593-13081 bp Feature: domain Description: CE4_NodB_like_6s_7s Location: 12596-13028 bp Feature: domain Description: CE4_NodB_like_6 s_7s Location: 12596 -13028 bp Feature: gene Location: 13226-13618 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACJSI010000387.1 (5378 bp)
Overview 1 RT 1: 549-3160 bp Neighborhood of RT #1 [549, 3160] RVT_N RVT-GII McrA Feature: gene Location: 549-2114 bp Feature: domain Description: RVT_N Location: 585-825 bp Feature: domain Description: RVT_N Location: 585-825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 879-1536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87 9-1536 bp Feature: domain Description: McrA Location: 1767-2091 bp Feature: domain Description: McrA Location: 17 67 -2091 bp Feature: gene Location: 2188-2442 bp Feature: gene Location: 2717-3160 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACJSI010000407.1 (5163 bp)
Overview 1 RT 1: 2875-5060 bp Neighborhood of RT #1 [2875, 5065] RVT_N RVT-GII RVT-GII GIIM Feature: gene Location: 2875-3039 bp Feature: gene Location: 3056-3382 bp Feature: gene Location: 3918-4421 bp Feature: domain Description: RVT_N Location: 3978-4170 bp Feature: domain Description: RVT_N Location: 3978 -4170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4227-4323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4227-4323 bp Feature: gene Location: 4484-5065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4514-4883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4514-48 8 3 bp Feature: domain Description: GIIM Note: maturase Location: 4940-5060 bp Feature: domain Description: GIIM Note: maturase Location: 4940-5060 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACJSI010000325.1 (6702 bp)
Overview 1 RT 1: 2428-6323 bp Neighborhood of RT #1 [2428, 6323] DUF1257 RVT_N RVT-GII GIIM McrA Feature: gene Location: 2428-2877 bp Feature: domain Description: DUF1257 Location: 2488-2836 bp Feature: domain Description: DUF1257 Location: 2488-2836 bp Feature: gene Location: 3023-4063 bp Feature: gene Location: 4024-5604 bp Feature: domain Description: RVT_N Location: 4060-4300 bp Feature: domain Description: RVT_N Location: 4060-4300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4357-5020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4357-5020 bp Feature: domain Description: GIIM Note: maturase Location: 5077-5269 bp Feature: domain Description: GIIM Note: maturase Location: 5077-5269 bp Feature: domain Description: McrA Location: 5293-5581 bp Feature: domain Description: McrA Location: 529 3-5581 bp Feature: gene Location: 5722-5946 bp Feature: gene Location: 6147-6323 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACJSI010000075.1 (31858 bp)
Overview 1 RT 1: 27181-31770 bp Neighborhood of RT #1 [27181, 31770] IMS_C RVT_N RVT-GII GIIM HNHc PRK02406 Feature: gene Location: 27181-27465 bp Feature: gene Location: 27513-27695 bp Feature: domain Description: IMS_C Location: 27528-27651 bp Feature: domain Description: IMS_C Location: 27528-27651 bp Feature: gene Location: 27826-29688 bp Feature: domain Description: RVT_N Location: 27874-28120 bp Feature: domain Description: RVT_N Location: 27874-28120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28162-28837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28162-28837 bp Feature: domain Description: GIIM Note: maturase Location: 28942-29173 bp Feature: domain Description: GIIM Note: maturase Location: 28942-29173 bp Feature: domain Description: HNHc Note: nucleases Location: 29371-29524 bp Feature: domain Description: HNHc Note: nucleases Location: 29371-29524 bp Feature: gene Location: 30432-31361 bp Feature: domain Description: PRK02406 Location: 30510-31338 bp Feature: domain Description: PRK02406 Location: 30510 -31338 bp Feature: gene Location: 31534-31770 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACJSI010000409.1 (5078 bp)
Overview 1 RT 1: 2-2556 bp Neighborhood of RT #1 [2, 2556] RVT-GII GIIM HNHc HTH_17 HTH_17 Feature: gene Location: 2-1165 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17-467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17-467 bp Feature: domain Description: GIIM Note: maturase Location: 548-773 bp Feature: domain Description: GIIM Note: maturase Location: 548-773 bp Feature: domain Description: HNHc Note: nucleases Location: 977-1142 bp Feature: domain Description: HNHc Note: nucleases Location: 977-11 42 bp Feature: gene Location: 1479-1994 bp Feature: domain Description: HTH_17 Location: 1491-1632 bp Feature: domain Description: HTH_17 Location: 1491-1632 bp Feature: domain Description: HTH_17 Location: 1842-1986 bp Feature: domain Description: HTH_17 Location: 1842-1986 bp Feature: gene Location: 2395-2556 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACJSI010000156.1 (14325 bp)
Overview 1 RT 1: 2-3048 bp Neighborhood of RT #1 [2, 3059] RVT-GII GIIM McrA YjgR CitB Feature: gene Location: 2-991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-185 bp Feature: domain Description: GIIM Note: maturase Location: 284-518 bp Feature: domain Description: GIIM Note: maturase Location: 284-518 bp Feature: domain Description: McrA Location: 608-884 bp Feature: domain Description: McrA Location: 608-884 bp Feature: gene Location: 1036-2481 bp Feature: domain Description: YjgR Location: 1489-1615 bp Feature: domain Description: YjgR Location: 1489-1615 bp Feature: gene Location: 2706-3059 bp Feature: domain Description: CitB Location: 2715-3048 bp Feature: domain Description: CitB Location: 2715-3048 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT