myRT

myRT report for GCA_014698145.1_ASM1469814v1

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Seq: JACJSM010000006.1 (258121 bp)
Overview 1 RT 1: 15922-21945 bp Neighborhood of RT #1 [15922, 21945] DUF4419 G1P_TT_short RVT-Retrons EamA EamA Feature: gene Location: 15922-17085 bp Feature: domain Description: DUF4419 Location: 16078-16972 bp Feature: domain Description: DUF441 9 Location: 1 6078-1 6972 bp Feature: gene Location: 17497-18285 bp Feature: domain Description: G1P_TT_short Location: 17560-18253 bp Feature: domain Description: G1 P_TT_short Location: 1 7560-1 8253 bp Feature: gene Location: 18408-20036 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 18954-19572 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 8954-1 9572 bp Feature: gene Location: 20159-21163 bp Feature: domain Description: EamA Location: 20201-20618 bp Feature: domain Description: EamA Location: 20201 -2061 8 bp Feature: domain Description: EamA Location: 20684-21086 bp Feature: domain Description: EamA Location: 20684-21 086 bp Feature: gene Location: 21160-21945 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4419 (pfam14388), G1P_TT_short (cd02538), RVT-Retrons, EamA (pfam00892)

Seq: JACJSM010000028.1 (73747 bp)
Overview 1 RT 1: 22628-27864 bp Neighborhood of RT #1 [22628, 28571] Cas2_I_II_III RVT-CRISPR Cas1_I-II-III HNHc Relaxase Feature: gene Location: 22628-23170 bp Feature: gene Location: 23748-24029 bp Feature: domain Description: Cas2_I_II_III Location: 23760-23988 bp Feature: domain Description: Cas2 _I_II_III Location: 2 3760-2 3988 bp Feature: gene Location: 24129-26144 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 24318-24927 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2 4318-2 492 7 bp Feature: domain Description: Cas1_I-II-III Location: 25149-26106 bp Feature: domain Description: Cas1_I-II-III Location: 2 5149-2 6106 bp Feature: gene Location: 26746-27033 bp Feature: domain Description: HNHc Note: nucleases Location: 26794-26983 bp Feature: domain Description: HNHc Note: nucleases Location: 2 6794-2 6983 bp Feature: gene Location: 27183-28571 bp Feature: domain Description: Relaxase Location: 27207-27864 bp Feature: domain Description: Relaxase Location: 2 72 07-2 7864 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, Cas1_I-II-III (cl00656), HNHc (smart00507), Relaxase (pfam03432)