myRT

myRT report for GCA_014698475.1_ASM1469847v1

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Seq: JACJTB010000011.1 (143647 bp)
Overview 1 RT 1: 6420-10782 bp Neighborhood of RT #1 [6420, 10782] RVT-Retrons Feature: gene Location: 6420-6617 bp Feature: gene Location: 6955-7125 bp Feature: gene Location: 7308-8348 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7491-8103 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7491 -81 03 bp Feature: gene Location: 8615-8875 bp Feature: gene Location: 9073-10782 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: JACJTB010000028.1 (87197 bp)
Overview 1 RT 1: 64526-68119 bp Neighborhood of RT #1 [64526, 68119] YfmG RVT-DGRs HTH_XRE Feature: gene Location: 64526-64672 bp Feature: gene Location: 64850-65689 bp Feature: domain Description: YfmG Location: 64904-65672 bp Feature: domain Description: YfmG Location: 64904-65672 bp Feature: gene Location: 65919-66977 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 66129-66771 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6612 9-66771 bp Feature: gene Location: 67463-67789 bp Feature: domain Description: HTH_XRE Location: 67559-67694 bp Feature: domain Description: HTH_XRE Location: 67559-67694 bp Feature: gene Location: 67859-68119 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), RVT-DGRs, HTH_XRE (smart00530)

Seq: JACJTB010000027.1 (87936 bp)
Overview 1 RT 1: 97-4390 bp Neighborhood of RT #1 [97, 4390] RVT-UG7 dha_pts PtsH PtsA Feature: gene Location: 97-1152 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 508-916 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 508-916 bp Feature: gene Location: 1400-3895 bp Feature: domain Description: dha_pts Location: 1406-1775 bp Feature: domain Description: dha_pts Location: 1406-1775 bp Feature: domain Description: PtsH Location: 1883-2138 bp Feature: domain Description: PtsH Location: 1883 -213 8 bp Feature: domain Description: PtsA Location: 2207-3890 bp Feature: domain Description: PtsA Location: 2207-3 890 bp Feature: gene Location: 3992-4390 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, dha_pts (TIGR02364), PtsH (COG1925), PtsA (COG1080)

Seq: JACJTB010000073.1 (19813 bp)
Overview 1 RT 1: 17712-19704 bp Neighborhood of RT #1 [17712, 19727] RVT_N RVT-GII GIIM Feature: gene Location: 17712-17888 bp Feature: gene Location: 18020-18277 bp Feature: gene Location: 18477-19727 bp Feature: domain Description: RVT_N Location: 18513-18759 bp Feature: domain Description: RVT_N Location: 18513-18759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18801-19500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18801-19500 bp Feature: domain Description: GIIM Note: maturase Location: 19587-19704 bp Feature: domain Description: GIIM Note: maturase Location: 19587-19704 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JACJTB010000031.1 (82524 bp)
Overview 1 RT 1: 477-3493 bp Neighborhood of RT #1 [477, 3501] RVT_N RVT-GII McrA PRK12567 Feature: gene Location: 477-1988 bp Feature: domain Description: RVT_N Location: 513-759 bp Feature: domain Description: RVT_N Location: 5 13-75 9 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 810-1404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 810-1404 bp Feature: domain Description: McrA Location: 1635-1959 bp Feature: domain Description: McrA Location: 1635 -195 9 bp Feature: gene Location: 2094-2549 bp Feature: gene Location: 2836-3501 bp Feature: domain Description: PRK12567 Location: 2842-3493 bp Feature: domain Description: PRK125 67 Location: 2842-3493 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, McrA (COG4058), PRK12567 (putative monovalent cation/H+ antiporter subunit B; Reviewed)