myRT

myRT report for GCA_014698795.1_ASM1469879v1

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Seq: JACJTR010000129.1 (4349 bp)
Overview 1 RT 1: 2457-4229 bp Neighborhood of RT #1 [2457, 4231] RVT_N RVT-GII Feature: gene Location: 2457-2921 bp Feature: gene Location: 3753-3953 bp Feature: domain Description: RVT_N Location: 3756-3930 bp Feature: domain Description: RVT_N Location: 3756-3930 bp Feature: gene Location: 4040-4231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4043-4229 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4043-4229 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: JACJTR010000067.1 (22076 bp)
Overview 1 RT 1: 5453-10066 bp Neighborhood of RT #1 [5453, 10086] HNHc McrA RVT-UG19 DUF4365 Feature: gene Location: 5453-5899 bp Feature: domain Description: HNHc Note: nucleases Location: 5474-5630 bp Feature: domain Description: HNHc Note: nucleases Location: 5474-5630 bp Feature: domain Description: McrA Location: 5663-5822 bp Feature: domain Description: McrA Location: 5663-582 2 bp Feature: gene Location: 5869-6138 bp Feature: gene Location: 6245-8617 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 6626-7109 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 662 6-7109 bp Feature: gene Location: 9053-9595 bp Feature: gene Location: 9592-10086 bp Feature: domain Description: DUF4365 Location: 9616-10066 bp Feature: domain Description: DUF4365 Location: 9616-10066 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HNHc (smart00507), McrA (COG4058), RVT-UG19, DUF4365 (pfam14280)

Seq: JACJTR010000042.1 (51526 bp)
Overview 1 RT 1: 18578-21828 bp Neighborhood of RT #1 [18578, 22031] RVT-Retrons RRM2_VICKZ RRM Feature: gene Location: 18578-18763 bp Feature: gene Location: 18795-19133 bp Feature: gene Location: 19656-20726 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19830-20436 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1983 0-2043 6 bp Feature: gene Location: 20753-21289 bp Feature: gene Location: 21375-22031 bp Feature: domain Description: RRM2_VICKZ Location: 21444-21618 bp Feature: domain Description: RRM2_VICKZ Location: 21444-21618 bp Feature: domain Description: RRM Location: 21633-21828 bp Feature: domain Description: RRM Location: 2163 3 -21828 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, RRM2_VICKZ (cd12359), RRM (smart00360)

Seq: JACJTR010000041.1 (52965 bp)
Overview 1 RT 1: 46209-49936 bp Neighborhood of RT #1 [46209, 49936] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 46209-46574 bp Feature: gene Location: 46883-47392 bp Feature: gene Location: 47447-49120 bp Feature: domain Description: RVT_N Location: 47489-47735 bp Feature: domain Description: RVT_N Location: 4 74 89-4 7735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47783-48422 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 7783-4 84 22 bp Feature: domain Description: GIIM Note: maturase Location: 48500-48728 bp Feature: domain Description: GIIM Note: maturase Location: 4 8500-4 8728 bp Feature: domain Description: HNHc Note: nucleases Location: 48932-49097 bp Feature: domain Description: HNHc Note: nucleases Location: 4 8932-4 9097 bp Feature: gene Location: 49164-49439 bp Feature: gene Location: 49631-49936 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JACJTR010000044.1 (46575 bp)
Overview 1 RT 1: 20695-24900 bp Neighborhood of RT #1 [20695, 24923] RVT_N RVT-GII McrA MFS_1 Feature: gene Location: 20695-21366 bp Feature: gene Location: 21375-21917 bp Feature: gene Location: 22175-23743 bp Feature: domain Description: RVT_N Location: 22214-22454 bp Feature: domain Description: RVT_N Location: 22214-2245 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22508-23165 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 225 08-23165 bp Feature: domain Description: McrA Location: 23396-23720 bp Feature: domain Description: McrA Location: 23396-23720 bp Feature: gene Location: 24406-24681 bp Feature: gene Location: 24678-24923 bp Feature: domain Description: MFS_1 Location: 24699-24900 bp Feature: domain Description: MFS_1 Location: 24699-24900 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, McrA (COG4058), MFS_1 (pfam07690)