myRT

myRT report for GCA_014698825.1_ASM1469882v1

Download annotations/find similar RTs

Seq: JACJTT010000003.1 (326963 bp)
Overview 1 RT 1: 266117-269897 bp Neighborhood of RT #1 [266117, 269897] COG1848 RVT-Retrons Feature: gene Location: 266117-266365 bp Feature: gene Location: 266740-267033 bp Feature: domain Description: COG1848 Location: 266746-266941 bp Feature: domain Description: COG1 848 Location: 266746-266941 bp Feature: gene Location: 267564-268664 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 267750-268356 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 267750-268356 bp Feature: gene Location: 268672-269541 bp Feature: gene Location: 269733-269897 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG1848 (Predicted nucleic acid-binding protein, contains PIN domain ), RVT-Retrons

Seq: JACJTT010000028.1 (68359 bp)
Overview 1 RT 1: 802-5420 bp Neighborhood of RT #1 [802, 5420] RVT-CRISPR Cas1_I-II-III Feature: gene Location: 802-1224 bp Feature: gene Location: 1753-2370 bp Feature: gene Location: 2812-4818 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3001-3610 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3001-3610 bp Feature: domain Description: Cas1_I-II-III Location: 3823-4780 bp Feature: domain Description: Cas1_I-II-III Location: 382 3-4780 bp Feature: gene Location: 4849-4989 bp Feature: gene Location: 5232-5420 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656)

Seq: JACJTT010000011.1 (124684 bp)
Overview 1 RT 1: 16196-20682 bp Neighborhood of RT #1 [16196, 20682] ycf46 RVT-UG7 HTH_XRE Feature: gene Location: 16196-16393 bp Feature: gene Location: 16560-18071 bp Feature: domain Description: ycf46 Location: 16563-18027 bp Feature: domain Description: ycf46 Location: 16563 -18027 bp Feature: gene Location: 18366-19904 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 18738-19158 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1873 8-19158 bp Feature: gene Location: 20028-20345 bp Feature: domain Description: HTH_XRE Location: 20154-20310 bp Feature: domain Description: HTH_XRE Location: 20154-203 10 bp Feature: gene Location: 20494-20682 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ycf46 (CHL00195), RVT-UG7, HTH_XRE (smart00530)