myRT

myRT report for GCA_014843905.1_ASM1484390v1

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Seq: LPVS01000216.1 (1566 bp)
Overview 1 RT 1: 1-1421 bp Neighborhood of RT #1 [1, 1421] RVT-GII Feature: gene Location: 1-969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 217-871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 7-871 bp Feature: gene Location: 1161-1421 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: LPVS01000020.1 (23765 bp)
Overview 1 RT 1: 10700-12438 bp 2 RT 2: 20788-23495 bp Neighborhood of RT #1 [10700, 12438] RVT-GII Neighborhood of RT #2 [20788, 23495] RVT-GII Feature: gene Location: 10700-10909 bp Feature: gene Location: 10992-11204 bp Feature: gene Location: 11424-11591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11442-11574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11442 -11574 bp Feature: gene Location: 11895-12464 bp Feature: gene Location: 12277-12438 bp Feature: gene Location: 20788-20940 bp Feature: gene Location: 21023-21463 bp Feature: gene Location: 21456-21797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21621-21696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 162 1-2 1696 bp Feature: gene Location: 22766-22921 bp Feature: gene Location: 23358-23495 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: LPVS01000105.1 (62522 bp)
Overview 1 RT 1: 40316-45222 bp Neighborhood of RT #1 [40316, 45224] PRK05658 RVT-GII GIIM COG4274 YuxK Feature: gene Location: 40316-42346 bp Feature: domain Description: PRK05658 Location: 40379-42341 bp Feature: domain Description: PRK05658 Location: 403 79-423 41 bp Feature: gene Location: 42670-42804 bp Feature: gene Location: 43008-44267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43200-43821 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43 200-43 821 bp Feature: domain Description: GIIM Note: maturase Location: 43869-44082 bp Feature: domain Description: GIIM Note: maturase Location: 43 869-44082 bp Feature: gene Location: 44490-44783 bp Feature: domain Description: COG4274 Location: 44493-44778 bp Feature: domain Description: COG4274 Location: 44493 -44778 bp Feature: gene Location: 44844-45224 bp Feature: domain Description: YuxK Location: 44850-45222 bp Feature: domain Description: YuxK Location: 44850-45222 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), RVT-GII, GIIM (pfam08388), COG4274 (Uncharacterized protein, contains GYD domain ), YuxK (COG3011)

Seq: LPVS01000038.1 (183668 bp)
Overview 1 RT 1: 5437-9553 bp Neighborhood of RT #1 [5437, 9570] groES groEL RVT-GII Phd PIN_MT3492-like Feature: gene Location: 5437-5733 bp Feature: domain Description: groES Location: 5452-5728 bp Feature: domain Description: groES Location: 54 52-5728 bp Feature: gene Location: 5804-7447 bp Feature: domain Description: groEL Location: 5807-7445 bp Feature: domain Description: groEL Location: 5807-74 4 5 bp Feature: gene Location: 8113-8421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8119-8368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8119-8368 bp Feature: gene Location: 8873-9145 bp Feature: domain Description: Phd Location: 8906-9131 bp Feature: domain Description: Phd Location: 8906-9131 bp Feature: gene Location: 9145-9570 bp Feature: domain Description: PIN_MT3492-like Location: 9151-9553 bp Feature: domain Description: PIN_MT34 92-like Location: 9151-9553 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT groES (PRK14533), groEL (PRK12852), RVT-GII, Phd (COG4118), PIN_MT3492-like (cd09874)