myRT

myRT report for GCA_014855745.1_ASM1485574v1

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Seq: VKMJ01000139.1 (39795 bp)
Overview 1 RT 1: 30220-33993 bp Neighborhood of RT #1 [30220, 34028] PucG PRK09290 RVT-GII STAS_anti-anti-sigma_factors Feature: gene Location: 30220-31467 bp Feature: domain Description: PucG Location: 30265-31453 bp Feature: domain Description: PucG Location: 30265-31 453 bp Feature: gene Location: 31467-32753 bp Feature: domain Description: PRK09290 Location: 31503-32700 bp Feature: domain Description: PRK09290 Location: 31 503-32700 bp Feature: gene Location: 32802-33155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32877-33042 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32877-33042 bp Feature: gene Location: 33474-33620 bp Feature: gene Location: 33696-34028 bp Feature: domain Description: STAS_anti-anti-sigma_factors Location: 33708-33993 bp Feature: domain Description: STAS_anti-anti-sigma_factors Location: 33708-33993 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PucG (COG0075), PRK09290 (allantoate amidohydrolase; Reviewed), RVT-GII, STAS_anti-anti-sigma_factors (cd07043)

Seq: VKMJ01000223.1 (14062 bp)
Overview 1 RT 1: 9925-13384 bp Neighborhood of RT #1 [9925, 13384] PRK15287 FimA RVT-UG4 Feature: gene Location: 9925-10443 bp Feature: domain Description: PRK15287 Location: 9955-10441 bp Feature: domain Description: PRK152 87 Location: 9955-10441 bp Feature: gene Location: 10459-10992 bp Feature: domain Description: FimA Location: 10498-10990 bp Feature: domain Description: FimA Location: 10498-10990 bp Feature: gene Location: 11042-11917 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 11405-11849 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 11405-11849 bp Feature: gene Location: 12043-13005 bp Feature: gene Location: 13094-13384 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15287 (fimbrial minor subunit StfF), FimA (pfam16970), RVT-UG4

Seq: VKMJ01000074.1 (37013 bp)
Overview 1 RT 1: 343-3488 bp Neighborhood of RT #1 [343, 3493] RVT-GII Intron_maturas2 HNHc PRK12937 PRK10259 Feature: gene Location: 343-2136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 541-1381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 541-13 81 bp Feature: domain Description: Intron_maturas2 Location: 1507-1771 bp Feature: domain Description: Intron_maturas2 Location: 1507-1771 bp Feature: domain Description: HNHc Note: nucleases Location: 1915-2089 bp Feature: domain Description: HNHc Note: nucleases Location: 1915-2089 bp Feature: gene Location: 2287-3036 bp Feature: domain Description: PRK12937 Location: 2311-3028 bp Feature: domain Description: PRK1293 7 Location: 23 11-3 028 bp Feature: gene Location: 3233-3493 bp Feature: domain Description: PRK10259 Location: 3236-3488 bp Feature: domain Description: PRK10259 Location: 3 23 6-3 488 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK12937 (short chain dehydrogenase; Provisional), PRK10259 (hypothetical protein; Provisional)