myRT

myRT report for GCA_014857185.1_ASM1485718v1

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Seq: JACZFF010000008.1 (310420 bp)
Overview 1 RT 1: 37768-44636 bp Neighborhood of RT #1 [37768, 44638] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 37768-38496 bp Feature: domain Description: FimC Location: 37801-38479 bp Feature: domain Description: FimC Location: 37801 -38479 bp Feature: gene Location: 38528-41137 bp Feature: domain Description: FimD Location: 38585-41126 bp Feature: domain Description: FimD Location: 38585-41 1 26 bp Feature: gene Location: 41137-43215 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 41545-41989 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 41 545-41 989 bp Feature: gene Location: 43272-43712 bp Feature: domain Description: Integrase_1 Location: 43278-43494 bp Feature: domain Description: Integrase_1 Location: 43278-43494 bp Feature: gene Location: 43973-44638 bp Feature: domain Description: INT_P4_C Location: 44078-44636 bp Feature: domain Description: INT_P4_C Location: 44078-44636 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: JACZFF010000009.1 (141438 bp)
Overview 1 RT 1: 133043-138074 bp Neighborhood of RT #1 [133043, 138088] PHA02517 RVT-GII GIIM PHA02517 fghA_ester_D Feature: gene Location: 133043-133363 bp Feature: gene Location: 133975-134400 bp Feature: domain Description: PHA02517 Location: 133996-134335 bp Feature: domain Description: PHA02 517 Location: 133996-134335 bp Feature: gene Location: 134992-136515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 135265-135997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1352 65-135997 bp Feature: domain Description: GIIM Note: maturase Location: 136072-136270 bp Feature: domain Description: GIIM Note: maturase Location: 136072 -1362 70 bp Feature: gene Location: 136638-136973 bp Feature: domain Description: PHA02517 Location: 136641-136950 bp Feature: domain Description: PHA02 517 Location: 136641-136950 bp Feature: gene Location: 137252-138088 bp Feature: domain Description: fghA_ester_D Location: 137258-138074 bp Feature: domain Description: fghA_ester_D Location: 1372 58-138074 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), fghA_ester_D (TIGR02821)