myRT

myRT report for GCA_014859465.1_ASM1485946v1

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Seq: JACUUF010000373.1 (2444 bp)
Overview 1 RT 1: 1-2443 bp Neighborhood of RT #1 [1, 2443] AAA_21 RVT-Retrons Feature: gene Location: 1-1311 bp Feature: domain Description: AAA_21 Location: 94-763 bp Feature: domain Description: AAA_21 Location: 94-763 bp Feature: gene Location: 1308-2258 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1407-1974 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 407-1 974 bp Feature: gene Location: 2318-2443 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_21 (pfam13304), RVT-Retrons

Seq: JACUUF010000111.1 (10431 bp)
Overview 1 RT 1: 254-7913 bp Neighborhood of RT #1 [254, 8017] RVT-UG1 TerB_N terB TerB_C DUF2791 Feature: gene Location: 254-4090 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 881-1394 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 881-1394 bp Feature: gene Location: 4426-6687 bp Feature: domain Description: TerB_N Location: 4684-5293 bp Feature: domain Description: TerB_N Location: 4684-52 93 bp Feature: domain Description: terB Location: 5911-6223 bp Feature: domain Description: terB Location: 5911-62 2 3 bp Feature: domain Description: TerB_C Location: 6304-6682 bp Feature: domain Description: TerB_C Location: 6304-6682 bp Feature: gene Location: 6692-8017 bp Feature: domain Description: DUF2791 Location: 6707-7913 bp Feature: domain Description: DUF2 791 Location: 6707-7913 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG1, TerB_N (pfam13208), terB (cd07176), TerB_C (pfam15615), DUF2791 (pfam10923)

Seq: JACUUF010000273.1 (4189 bp)
Overview 1 RT 1: 3-1288 bp Neighborhood of RT #1 [3, 1288] RVT-CRISPR-like Feature: gene Location: 3-422 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 6-378 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 6-3 78 bp Feature: gene Location: 528-1118 bp Feature: gene Location: 1127-1288 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: JACUUF010000204.1 (5975 bp)
Overview 1 RT 1: 1189-3823 bp Neighborhood of RT #1 [1189, 3852] PHA00652 PHA00653 RVT-DGRs PRK11479 PRK11479 Feature: gene Location: 1189-1560 bp Feature: domain Description: PHA00652 Location: 1228-1531 bp Feature: domain Description: PHA00652 Location: 1228-1531 bp Feature: gene Location: 1570-1749 bp Feature: domain Description: PHA00653 Location: 1603-1732 bp Feature: domain Description: PHA00653 Location: 1603-1732 bp Feature: gene Location: 1875-2873 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2088-2682 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2088-2682 bp Feature: gene Location: 2858-3430 bp Feature: gene Location: 3427-3852 bp Feature: domain Description: PRK11479 Location: 3445-3574 bp Feature: domain Description: PRK114 79 Location: 34 4 5-3574 bp Feature: domain Description: PRK11479 Location: 3718-3823 bp Feature: domain Description: PRK114 79 Location: 3718-3823 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA00652 (hypothetical protein), PHA00653 (mtd;major tropism determinant), RVT-DGRs, PRK11479 (YaeF family permuted papain-like enzyme)

Seq: JACUUF010000188.1 (6515 bp)
Overview 1 RT 1: 2-5500 bp Neighborhood of RT #1 [2, 6372] RVT-UNC AAA_5 Feature: gene Location: 2-1480 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 224-875 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 224-875 bp Feature: gene Location: 1592-4165 bp Feature: gene Location: 4168-6372 bp Feature: domain Description: AAA_5 Location: 5203-5500 bp Feature: domain Description: AAA_5 Location: 5 203-5 5 00 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG9/RVT-DGRs/RVT-CRISPR/RVT-UG26(RVT-UNC), AAA_5 (pfam07728)