myRT

myRT report for GCA_014859565.1_ASM1485956v1

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Seq: JACUUA010000245.1 (4503 bp)
Overview 1 RT 1: 2-1513 bp Neighborhood of RT #1 [2, 4257] RVT-UG1 Feature: gene Location: 2-133 bp Feature: gene Location: 268-4257 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 970-1513 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 970-1 51 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG1

Seq: JACUUA010000016.1 (36318 bp)
Overview 1 RT 1: 21368-24000 bp Neighborhood of RT #1 [21368, 24041] PHA00652 PHA00653 RVT-DGRs PRK11479 PRK11479 Feature: gene Location: 21368-21739 bp Feature: domain Description: PHA00652 Location: 21401-21725 bp Feature: domain Description: PHA00652 Location: 2 1401-2 172 5 bp Feature: gene Location: 21770-21898 bp Feature: domain Description: PHA00653 Location: 21776-21887 bp Feature: domain Description: PHA00653 Location: 2 1776-2 1887 bp Feature: gene Location: 22063-23070 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 22276-22867 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 2 2 76-2 2 867 bp Feature: gene Location: 23051-23593 bp Feature: gene Location: 23595-24041 bp Feature: domain Description: PRK11479 Location: 23640-23877 bp Feature: domain Description: PRK11479 Location: 2 3640-2 3877 bp Feature: domain Description: PRK11479 Location: 23898-24000 bp Feature: domain Description: PRK11479 Location: 2 3898-2 4000 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA00652 (hypothetical protein), PHA00653 (mtd;major tropism determinant), RVT-DGRs, PRK11479 (YaeF family permuted papain-like enzyme)

Seq: JACUUA010000028.1 (27749 bp)
Overview 1 RT 1: 25-4755 bp Neighborhood of RT #1 [25, 4755] PRK09330 RVT-UNC Feature: gene Location: 25-243 bp Feature: gene Location: 279-1511 bp Feature: domain Description: PRK09330 Location: 336-1503 bp Feature: domain Description: PRK093 3 0 Location: 3 3 6-1503 bp Feature: gene Location: 1634-2755 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2012-2471 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2012-2471 bp Feature: gene Location: 2888-3907 bp Feature: gene Location: 3994-4755 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09330 (cell division protein FtsZ; Validated), RVT-UG11/RVT-DGRs/RVT-UG17/RVT-UG5(RVT-UNC)

Seq: JACUUA010000080.1 (14262 bp)
Overview 1 RT 1: 3156-10493 bp Neighborhood of RT #1 [3156, 10546] PRK08175 CopG_antitoxin RVT-UG8 RVT-UG3 MATE_DinF_like Feature: gene Location: 3156-4466 bp Feature: domain Description: PRK08175 Location: 3276-4452 bp Feature: domain Description: PRK08175 Location: 3276-4 4 52 bp Feature: gene Location: 4631-4816 bp Feature: domain Description: CopG_antitoxin Location: 4676-4814 bp Feature: domain Description: CopG_antitoxin Location: 4 676-4 814 bp Feature: gene Location: 5343-7376 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 5913-6360 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 5913-6360 bp Feature: gene Location: 7373-8662 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 7664-8156 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 7664 -8156 bp Feature: gene Location: 8928-9110 bp Feature: gene Location: 9200-10546 bp Feature: domain Description: MATE_DinF_like Location: 9242-10493 bp Feature: domain Description: MATE_DinF_like Location: 924 2-104 93 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08175 (aminotransferase; Validated), CopG_antitoxin (pfam12441), RVT-UG8, RVT-UG3, MATE_DinF_like (cd13136)

Seq: JACUUA010000115.1 (11101 bp)
Overview 1 RT 1: 10192-11099 bp Neighborhood of RT #1 [10192, 11099] RVT-GII Feature: gene Location: 10192-10512 bp Feature: gene Location: 10570-10725 bp Feature: gene Location: 10742-10966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10745-10919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10745 -10919 bp Feature: gene Location: 10971-11099 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII