myRT

myRT report for GCA_014859725.1_ASM1485972v1

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Seq: JACUTQ010000168.1 (4312 bp)
Overview 1 RT 1: 2199-4310 bp Neighborhood of RT #1 [2199, 4309] DUF1670 PRK06234 RVT-GII Feature: gene Location: 2199-2573 bp Feature: domain Description: DUF1670 Location: 2202-2514 bp Feature: domain Description: DUF1 670 Location: 2202-251 4 bp Feature: gene Location: 2769-3953 bp Feature: domain Description: PRK06234 Location: 2781-3948 bp Feature: domain Description: PRK06234 Location: 2781 -3948 bp Feature: gene Location: 4103-4309 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4106-4310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 06-431 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1670 (pfam07900), PRK06234 (methionine gamma-lyase; Provisional), RVT-GII

Seq: JACUTQ010000192.1 (3786 bp)
Overview 1 RT 1: 276-3786 bp Neighborhood of RT #1 [276, 3785] RVT-GII TPR TPR COG4951 Cas_Cas1 Feature: gene Location: 276-3098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 489-1101 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 489-1101 bp Feature: domain Description: TPR Location: 1185-1470 bp Feature: domain Description: TPR Location: 1185-1470 bp Feature: domain Description: TPR Location: 1599-1680 bp Feature: domain Description: TPR Location: 1599-1680 bp Feature: domain Description: COG4951 Location: 1707-2439 bp Feature: domain Description: COG4951 Location: 1707-2 439 bp Feature: gene Location: 3108-3785 bp Feature: domain Description: Cas_Cas1 Location: 3120-3786 bp Feature: domain Description: Cas_Cas1 Location: 312 0-3786 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, TPR (smart00028), COG4951 (Uncharacterized protein ), Cas_Cas1 (pfam01867)

Seq: JACUTQ010000119.1 (7131 bp)
Overview 1 RT 1: 3870-6799 bp Neighborhood of RT #1 [3870, 7020] Zn_Tnp_IS91 Y2_Tnp RVT_N RVT-GII GIIM Feature: gene Location: 3870-4967 bp Feature: domain Description: Zn_Tnp_IS91 Location: 3948-4191 bp Feature: domain Description: Zn_Tnp_IS91 Location: 3 948-4191 bp Feature: domain Description: Y2_Tnp Location: 4317-4821 bp Feature: domain Description: Y2_Tnp Location: 43 17-4821 bp Feature: gene Location: 5168-5476 bp Feature: gene Location: 5491-7020 bp Feature: domain Description: RVT_N Location: 5578-5818 bp Feature: domain Description: RVT_N Location: 5578-5818 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5869-6514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5869-6514 bp Feature: domain Description: GIIM Note: maturase Location: 6568-6799 bp Feature: domain Description: GIIM Note: maturase Location: 6568-6799 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Zn_Tnp_IS91 (pfam14319), Y2_Tnp (pfam04986), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)