myRT

myRT report for GCA_014859905.1_ASM1485990v1

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Seq: JACZKT010000002.1 (43393 bp)
Overview 1 RT 1: 39339-41911 bp Neighborhood of RT #1 [39339, 41911] ligand_gated_channel RVT-GII Feature: gene Location: 39339-39668 bp Feature: domain Description: ligand_gated_channel Location: 39384-39666 bp Feature: domain Description: ligand_gated_channel Location: 39384-39666 bp Feature: gene Location: 39727-39867 bp Feature: gene Location: 40044-41186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40104-40794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 401 04-40794 bp Feature: gene Location: 41211-41552 bp Feature: gene Location: 41549-41911 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACZKT010000033.1 (5976 bp)
Overview 1 RT 1: 2463-5860 bp Neighborhood of RT #1 [2463, 5952] Lipase_3 ApbE RVT-GII GIIM Feature: gene Location: 2463-3353 bp Feature: domain Description: Lipase_3 Location: 2688-3282 bp Feature: domain Description: Lipase_3 Location: 2 688-32 82 bp Feature: gene Location: 3750-4121 bp Feature: domain Description: ApbE Location: 3846-4044 bp Feature: domain Description: ApbE Location: 3846-4044 bp Feature: gene Location: 4663-5952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4912-5575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4912 -5575 bp Feature: domain Description: GIIM Note: maturase Location: 5644-5860 bp Feature: domain Description: GIIM Note: maturase Location: 5644-5860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACZKT010000262.1 (7390 bp)
Overview 1 RT 1: 4658-7146 bp Neighborhood of RT #1 [4658, 7202] InsE PHA02517 RVT-GII Feature: gene Location: 4658-4960 bp Feature: domain Description: InsE Location: 4670-4958 bp Feature: domain Description: InsE Location: 4670-4958 bp Feature: gene Location: 5008-5853 bp Feature: domain Description: PHA02517 Location: 5032-5818 bp Feature: domain Description: PHA02517 Location: 503 2-5818 bp Feature: gene Location: 5967-7202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6534-7146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 653 4-7146 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACZKT010000159.1 (7601 bp)
Overview 1 RT 1: 3-5843 bp Neighborhood of RT #1 [3, 5890] DUF4124 RVT_N RVT-GII GIIM HNHc PRK05567 MFS_TetA Feature: gene Location: 3-206 bp Feature: domain Description: DUF4124 Location: 39-198 bp Feature: domain Description: DUF4 124 Location: 39-198 bp Feature: gene Location: 1294-2994 bp Feature: domain Description: RVT_N Location: 1351-1588 bp Feature: domain Description: RVT_N Location: 1351-1588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1642-2290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 164 2-2290 bp Feature: domain Description: GIIM Note: maturase Location: 2341-2575 bp Feature: domain Description: GIIM Note: maturase Location: 234 1-2575 bp Feature: domain Description: HNHc Note: nucleases Location: 2794-2956 bp Feature: domain Description: HNHc Note: nucleases Location: 2794 -2956 bp Feature: gene Location: 3154-4623 bp Feature: domain Description: PRK05567 Location: 3160-4618 bp Feature: domain Description: PRK05567 Location: 3160-4 618 bp Feature: gene Location: 4631-5890 bp Feature: domain Description: MFS_TetA Location: 4682-5843 bp Feature: domain Description: MFS_TetA Location: 4 682-584 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACZKT010000475.1 (3472 bp)
Overview 1 RT 1: 1377-3471 bp Neighborhood of RT #1 [1377, 3470] PRK08317 RVT-GII Feature: gene Location: 1377-1508 bp Feature: gene Location: 1639-2442 bp Feature: domain Description: PRK08317 Location: 1726-2248 bp Feature: domain Description: PRK08317 Location: 1726-2248 bp Feature: gene Location: 3057-3470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3414-3471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3414-3471 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACZKT010000108.1 (13626 bp)
Overview 1 RT 1: 8301-12750 bp Neighborhood of RT #1 [8301, 12750] RMtype1_S_EcoBI-TRD1-CR1_like RMtype1_S_EcoBI-TRD1-CR1_like HsdM RVT-Retrons HTH_XRE Feature: gene Location: 8301-9608 bp Feature: domain Description: RMtype1_S_EcoBI-TRD1-CR1_like Location: 8622-8892 bp Feature: domain Description: RMtype1_S_EcoBI-TRD1-CR1_like Location: 86 22-8892 bp Feature: domain Description: RMtype1_S_EcoBI-TRD1-CR1_like Location: 9027-9552 bp Feature: domain Description: RMtype1_S_EcoBI-TRD1-CR1_like Location: 9027-9552 bp Feature: gene Location: 9598-11151 bp Feature: domain Description: HsdM Location: 9610-11131 bp Feature: domain Description: HsdM Location: 96 10-11131 bp Feature: gene Location: 11258-12244 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11483-12008 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11483-12008 bp Feature: gene Location: 12225-12530 bp Feature: domain Description: HTH_XRE Location: 12237-12408 bp Feature: domain Description: HTH_XRE Location: 12237-12408 bp Feature: gene Location: 12583-12750 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACZKT010000624.1 (3393 bp)
Overview 1 RT 1: 3-3388 bp Neighborhood of RT #1 [3, 3390] RVT_N RVT-GII GIIM HNHc COG1416 Feature: gene Location: 3-140 bp Feature: gene Location: 342-1970 bp Feature: domain Description: RVT_N Location: 390-633 bp Feature: domain Description: RVT_N Location: 390-633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 678-1317 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67 8-1317 bp Feature: domain Description: GIIM Note: maturase Location: 1371-1602 bp Feature: domain Description: GIIM Note: maturase Location: 137 1-1602 bp Feature: domain Description: HNHc Note: nucleases Location: 1809-1959 bp Feature: domain Description: HNHc Note: nucleases Location: 1809-1959 bp Feature: gene Location: 2115-2825 bp Feature: gene Location: 2965-3390 bp Feature: domain Description: COG1416 Location: 3052-3388 bp Feature: domain Description: COG1416 Location: 3052-3388 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: JACZKT010000225.1 (3690 bp)
Overview 1 RT 1: 1-2918 bp Neighborhood of RT #1 [1, 2918] RVT-GII Hemerythrin Feature: gene Location: 1-1518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 247-886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 247-8 8 6 bp Feature: gene Location: 1650-2117 bp Feature: domain Description: Hemerythrin Location: 1677-2058 bp Feature: domain Description: Hemerythrin Location: 1677-2058 bp Feature: gene Location: 2262-2918 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT