myRT

myRT report for GCA_014860005.1_ASM1486000v1

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Seq: JACZKP010000084.1 (18076 bp)
Overview 1 RT 1: 10969-15924 bp Neighborhood of RT #1 [10969, 15924] tol_pal_ybgF tol_pal_ybgF TPR_21 TPR_16 tol_pal_ybgF tol_pal_ybgF tol_pal_ybgF TPR_16 IscA RVT-GII GIIM Feature: gene Location: 10969-13647 bp Feature: domain Description: tol_pal_ybgF Location: 11059-11260 bp Feature: domain Description: tol_pal_ybgF Location: 1 1 059-1 1 260 bp Feature: domain Description: tol_pal_ybgF Location: 11272-11455 bp Feature: domain Description: tol_pal_ybgF Location: 1 1 272-1 1 455 bp Feature: domain Description: TPR_21 Location: 11467-11686 bp Feature: domain Description: TPR_21 Location: 1 1 467-1 1 686 bp Feature: domain Description: TPR_16 Location: 11878-12004 bp Feature: domain Description: TPR_1 6 Location: 1 1 878-1 2004 bp Feature: domain Description: tol_pal_ybgF Location: 12064-12310 bp Feature: domain Description: tol_pal_ybgF Location: 1 2064-1 231 0 bp Feature: domain Description: tol_pal_ybgF Location: 12370-12685 bp Feature: domain Description: tol_pal_ybgF Location: 1 2370-1 2685 bp Feature: domain Description: tol_pal_ybgF Location: 12703-12997 bp Feature: domain Description: tol_pal_ybgF Location: 1 2703-1 2997 bp Feature: domain Description: TPR_16 Location: 13099-13222 bp Feature: domain Description: TPR_1 6 Location: 1 3099-1 3222 bp Feature: gene Location: 13700-14047 bp Feature: domain Description: IscA Location: 13730-14042 bp Feature: domain Description: IscA Location: 1 3730-1 4042 bp Feature: gene Location: 14194-14613 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14233-14413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4233-1 441 3 bp Feature: domain Description: GIIM Note: maturase Location: 14461-14593 bp Feature: domain Description: GIIM Note: maturase Location: 1 4461 -1 4593 bp Feature: gene Location: 14740-14931 bp Feature: gene Location: 15031-15924 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT tol_pal_ybgF (TIGR02795), TPR_21 (pfam09976), TPR_16 (pfam13432), IscA (TIGR02011), RVT-GII, GIIM (pfam08388)

Seq: JACZKP010000137.1 (46732 bp)
Overview 1 RT 1: 2024-4472 bp Neighborhood of RT #1 [2024, 4472] RVT-GII GIIM Feature: gene Location: 2024-2356 bp Feature: gene Location: 2389-2601 bp Feature: gene Location: 2706-3722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2712-3279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 712 -32 79 bp Feature: domain Description: GIIM Note: maturase Location: 3330-3528 bp Feature: domain Description: GIIM Note: maturase Location: 3330-352 8 bp Feature: gene Location: 3712-4221 bp Feature: gene Location: 4245-4472 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACZKP010000148.1 (8396 bp)
Overview 1 RT 1: 4163-8262 bp Neighborhood of RT #1 [4163, 8285] FAS1 FAS1 FAS1 FAS1 RVT-GII RVT_1 crtI_fam Feature: gene Location: 4163-4660 bp Feature: domain Description: FAS1 Location: 4244-4658 bp Feature: domain Description: FAS1 Location: 4244-4658 bp Feature: gene Location: 4714-6096 bp Feature: domain Description: FAS1 Location: 4849-5269 bp Feature: domain Description: FAS1 Location: 4849-5269 bp Feature: domain Description: FAS1 Location: 5284-5683 bp Feature: domain Description: FAS1 Location: 5284-5683 bp Feature: domain Description: FAS1 Location: 5704-6091 bp Feature: domain Description: FAS1 Location: 5704-6091 bp Feature: gene Location: 6153-6617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6162-6312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6162-63 12 bp Feature: domain Description: RVT_1 Location: 6318-6411 bp Feature: domain Description: RVT_1 Location: 63 18-6411 bp Feature: gene Location: 7017-8285 bp Feature: domain Description: crtI_fam Location: 7020-8262 bp Feature: domain Description: crtI_fam Location: 7020-8262 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FAS1 (smart00554), RVT-GII, RVT_1 (pfam00078), crtI_fam (TIGR02734)

Seq: JACZKP010000129.1 (4250 bp)
Overview 1 RT 1: 1-4226 bp Neighborhood of RT #1 [1, 4249] RMtype1_S_EcoAO83I-TRD1-CR1_like RMtype1_S_EcoAO83I-TRD1-CR1_like RVT-AbiP2 Nmad2 N6_Mtase Feature: gene Location: 1-1296 bp Feature: domain Description: RMtype1_S_EcoAO83I-TRD1-CR1_like Location: 433-712 bp Feature: domain Description: RMtype1_S_EcoAO83I-TRD1-CR1_like Location: 4 33-712 bp Feature: domain Description: RMtype1_S_EcoAO83I-TRD1-CR1_like Location: 769-1237 bp Feature: domain Description: RMtype1_S_EcoAO83I-TRD1-CR1_like Location: 769-1237 bp Feature: gene Location: 1293-2807 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1737-2187 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1737-2187 bp Feature: gene Location: 2923-3540 bp Feature: domain Description: Nmad2 Location: 2926-3433 bp Feature: domain Description: Nmad2 Location: 2926-34 33 bp Feature: gene Location: 3800-4249 bp Feature: domain Description: N6_Mtase Location: 3803-4226 bp Feature: domain Description: N6_Mtase Location: 3803-4 226 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RMtype1_S_EcoAO83I-TRD1-CR1_like (cd17267), RVT-AbiP2, Nmad2 (pfam18753), N6_Mtase (pfam02384)