myRT

myRT report for GCA_014860635.1_ASM1486063v1

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Seq: JACZJH010000127.1 Bacteroidales bacterium isolate MAG14 bacteroidales_4_contig_133610, whole genome shotgun sequence (2372 bp)
Overview 1 RT 1: 1-2361 bp Neighborhood of RT #1 [1, 2369] DMRL_synthase RVT-GII GIIM Peptidase_S46 Feature: gene Location: 1-141 bp Feature: domain Description: DMRL_synthase Location: 7-127 bp Feature: domain Description: DMRL_synthase Location: 7-1 27 bp Feature: gene Location: 255-1685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 627-1236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 627-1 236 bp Feature: domain Description: GIIM Note: maturase Location: 1287-1497 bp Feature: domain Description: GIIM Note: maturase Location: 1 287-1 497 bp Feature: gene Location: 1774-2121 bp Feature: gene Location: 2202-2369 bp Feature: domain Description: Peptidase_S46 Location: 2205-2361 bp Feature: domain Description: Peptidase_S46 Location: 2205-2361 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DMRL_synthase (pfam00885), RVT-GII, GIIM (pfam08388), Peptidase_S46 (pfam10459)

Seq: JACZJH010001329.1 Bacteroidales bacterium isolate MAG14 bacteroidales_4_contig_1378048, whole genome shotgun sequence (2146 bp)
Overview 1 RT 1: 2-1914 bp Neighborhood of RT #1 [2, 2144] RVT-UG28b Feature: gene Location: 2-580 bp Feature: gene Location: 768-2144 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 1173-1914 bp Feature: RT Description: RVT-UG2 8b Note: UG2 8b RT Location: 1173-1914 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG28b

Seq: JACZJH010000133.1 Bacteroidales bacterium isolate MAG14 bacteroidales_4_contig_137904, whole genome shotgun sequence (7107 bp)
Overview 1 RT 1: 3222-6515 bp Neighborhood of RT #1 [3222, 6523] HTH_ARAC TolBN TPR TPR_11 TPR TPR RVT-GII Feature: gene Location: 3222-5330 bp Feature: domain Description: HTH_ARAC Location: 3312-3546 bp Feature: domain Description: HTH_ARAC Location: 3 3 12-3 546 bp Feature: domain Description: TolBN Location: 3723-4098 bp Feature: domain Description: TolBN Location: 3 723 -4098 bp Feature: domain Description: TPR Location: 4224-4428 bp Feature: domain Description: TPR Location: 4224-4428 bp Feature: domain Description: TPR_11 Location: 4446-4530 bp Feature: domain Description: TPR_11 Location: 4446-453 0 bp Feature: domain Description: TPR Location: 4635-4911 bp Feature: domain Description: TPR Location: 463 5-4911 bp Feature: domain Description: TPR Location: 4962-5151 bp Feature: domain Description: TPR Location: 4962-5151 bp Feature: gene Location: 5487-5639 bp Feature: gene Location: 5666-6523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5930-6515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 593 0-6515 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_ARAC (smart00342), TolBN (COG5616), TPR (smart00028), TPR_11 (pfam13414), RVT-GII

Seq: JACZJH010000939.1 Bacteroidales bacterium isolate MAG14 bacteroidales_4_contig_989917, whole genome shotgun sequence (3945 bp)
Overview 1 RT 1: 3-3367 bp Neighborhood of RT #1 [3, 3567] ScCit3_like PRK09672 RVT-GII GIIM Feature: gene Location: 3-1070 bp Feature: gene Location: 1155-1955 bp Feature: domain Description: ScCit3_like Location: 1497-1698 bp Feature: domain Description: ScCit3_like Location: 14 97-1698 bp Feature: domain Description: PRK09672 Location: 1758-1875 bp Feature: domain Description: PRK09672 Location: 1758-1875 bp Feature: gene Location: 2041-3567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2503-3118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2503-3118 bp Feature: domain Description: GIIM Note: maturase Location: 3166-3367 bp Feature: domain Description: GIIM Note: maturase Location: 3166-3367 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ScCit3_like (cd06106), PRK09672 (phage exclusion protein Lit; Provisional), RVT-GII, GIIM (pfam08388)