myRT

myRT report for GCA_014860935.1_ASM1486093v1

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Seq: JACZQJ010000112.1 Escherichia coli strain 191E2 191E2_S52_R1_(paired)_contig_112, whole genome shotgun sequence (17744 bp)
Overview 1 RT 1: 14657-17741 bp Neighborhood of RT #1 [14657, 17741] COG2085 PHA02517 RVT-GII GIIM Feature: gene Location: 14657-15070 bp Feature: domain Description: COG2085 Location: 14756-14903 bp Feature: domain Description: COG2085 Location: 1 4756-1 4903 bp Feature: gene Location: 15236-15412 bp Feature: domain Description: PHA02517 Location: 15239-15341 bp Feature: domain Description: PHA0251 7 Location: 1 5239-1 5341 bp Feature: gene Location: 15565-17088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15838-16570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5838-1 6570 bp Feature: domain Description: GIIM Note: maturase Location: 16645-16843 bp Feature: domain Description: GIIM Note: maturase Location: 1 6645-1 6843 bp Feature: gene Location: 17382-17741 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2085 (Predicted dinucleotide-binding enzyme ), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JACZQJ010000065.1 Escherichia coli strain 191E2 191E2_S52_R1_(paired)_contig_65, whole genome shotgun sequence (34614 bp)
Overview 1 RT 1: 24565-27620 bp Neighborhood of RT #1 [24565, 27620] RVT-GII RVT-GII GIIM Feature: gene Location: 24565-25470 bp Feature: gene Location: 25608-25799 bp Feature: gene Location: 25956-26495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26286-26364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 62 86-2 6364 bp Feature: gene Location: 26523-27044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26529-26811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 652 9-2 6811 bp Feature: domain Description: GIIM Note: maturase Location: 26859-27039 bp Feature: domain Description: GIIM Note: maturase Location: 2 6859-2 7039 bp Feature: gene Location: 27143-27322 bp Feature: gene Location: 27432-27620 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACZQJ010000008.1 Escherichia coli strain 191E2 191E2_S52_R1_(paired)_contig_8, whole genome shotgun sequence (110647 bp)
Overview 1 RT 1: 82116-88147 bp Neighborhood of RT #1 [82116, 88147] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 82116-83036 bp Feature: domain Description: AbiEii Location: 82158-82899 bp Feature: domain Description: AbiEii Location: 82158-82899 bp Feature: gene Location: 83023-83826 bp Feature: domain Description: AbiEi_3_N Location: 83056-83317 bp Feature: domain Description: AbiEi_3 _N Location: 83 056-83 3 17 bp Feature: domain Description: AbiEi_3 Location: 83329-83785 bp Feature: domain Description: AbiEi_3 Location: 83 3 29-83 785 bp Feature: gene Location: 84121-87330 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 84649-85138 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 84649-8513 8 bp Feature: domain Description: nitrilase Location: 86644-87241 bp Feature: domain Description: nitrilase Location: 86644-87241 bp Feature: gene Location: 87491-87631 bp Feature: domain Description: Phage_ASH Location: 87518-87611 bp Feature: domain Description: Phage_ASH Location: 87518-87611 bp Feature: gene Location: 87677-88147 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: JACZQJ010000092.1 Escherichia coli strain 191E2 191E2_S52_R1_(paired)_contig_92, whole genome shotgun sequence (4120 bp)
Overview 1 RT 1: 124-2268 bp Neighborhood of RT #1 [124, 2268] RVT-GII Feature: gene Location: 124-438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 244-346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24 4 -34 6 bp Feature: gene Location: 693-1370 bp Feature: gene Location: 1900-2268 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII