myRT

myRT report for GCA_014860995.1_ASM1486099v1

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Seq: JACZQH010000107.1 Escherichia coli strain 189G10 189G10_S64_R1_(paired)_contig_107, whole genome shotgun sequence (34652 bp)
Overview 1 RT 1: 5693-10089 bp Neighborhood of RT #1 [5693, 10089] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 5693-6955 bp Feature: domain Description: YesM Location: 6206-6947 bp Feature: domain Description: YesM Location: 6206-6947 bp Feature: gene Location: 6985-7155 bp Feature: gene Location: 7610-8131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7616-7898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 761 6-7898 bp Feature: domain Description: GIIM Note: maturase Location: 7946-8126 bp Feature: domain Description: GIIM Note: maturase Location: 7946-81 26 bp Feature: gene Location: 8159-8698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8489-8567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8489-8567 bp Feature: gene Location: 8729-8926 bp Feature: gene Location: 9184-10089 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)

Seq: JACZQH010000164.1 Escherichia coli strain 189G10 189G10_S64_R1_(paired)_contig_164, whole genome shotgun sequence (3506 bp)
Overview 1 RT 1: 94-2238 bp Neighborhood of RT #1 [94, 2238] RVT-GII Feature: gene Location: 94-408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 214-316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 14-316 bp Feature: gene Location: 663-1340 bp Feature: gene Location: 1870-2238 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JACZQH010000043.1 Escherichia coli strain 189G10 189G10_S64_R1_(paired)_contig_43, whole genome shotgun sequence (11740 bp)
Overview 1 RT 1: 1-2921 bp Neighborhood of RT #1 [1, 3088] RVT-GII GIIM PHA02517 COG2085 Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 0-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 173 7-193 5 bp Feature: gene Location: 2333-2509 bp Feature: domain Description: PHA02517 Location: 2336-2438 bp Feature: domain Description: PHA02517 Location: 23 3 6-243 8 bp Feature: gene Location: 2675-3088 bp Feature: domain Description: COG2085 Location: 2774-2921 bp Feature: domain Description: COG2085 Location: 2774-2921 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), COG2085 (Predicted dinucleotide-binding enzyme )

Seq: JACZQH010000081.1 Escherichia coli strain 189G10 189G10_S64_R1_(paired)_contig_81, whole genome shotgun sequence (110752 bp)
Overview 1 RT 1: 82222-88253 bp Neighborhood of RT #1 [82222, 88253] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 82222-83142 bp Feature: domain Description: AbiEii Location: 82264-83005 bp Feature: domain Description: AbiEii Location: 82264 -83005 bp Feature: gene Location: 83129-83932 bp Feature: domain Description: AbiEi_3_N Location: 83162-83423 bp Feature: domain Description: AbiEi_3_N Location: 83162-834 23 bp Feature: domain Description: AbiEi_3 Location: 83435-83891 bp Feature: domain Description: AbiEi_3 Location: 834 35-83891 bp Feature: gene Location: 84227-87436 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 84755-85244 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 84 755-8524 4 bp Feature: domain Description: nitrilase Location: 86750-87347 bp Feature: domain Description: nitrilase Location: 86750-8734 7 bp Feature: gene Location: 87597-87737 bp Feature: domain Description: Phage_ASH Location: 87624-87717 bp Feature: domain Description: Phage_ASH Location: 87624 -87717 bp Feature: gene Location: 87783-88253 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)