myRT

myRT report for GCA_014861005.1_ASM1486100v1

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Seq: JACZQG010000111.1 Escherichia coli strain 186B2 186B2_S167_R1_(paired)_contig_111, whole genome shotgun sequence (16357 bp)
Overview 1 RT 1: 3913-8010 bp Neighborhood of RT #1 [3913, 8177] PHA02517 RVT-GII GIIM PHA02517 COG2085 Feature: gene Location: 3913-4737 bp Feature: gene Location: 4864-5154 bp Feature: domain Description: PHA02517 Location: 4870-5089 bp Feature: domain Description: PHA0251 7 Location: 4870-5089 bp Feature: gene Location: 5746-7269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6019-6751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 601 9-6751 bp Feature: domain Description: GIIM Note: maturase Location: 6826-7024 bp Feature: domain Description: GIIM Note: maturase Location: 6826-7024 bp Feature: gene Location: 7422-7598 bp Feature: domain Description: PHA02517 Location: 7425-7527 bp Feature: domain Description: PHA0251 7 Location: 7425-7527 bp Feature: gene Location: 7764-8177 bp Feature: domain Description: COG2085 Location: 7863-8010 bp Feature: domain Description: COG2085 Location: 7863-801 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG2085 (Predicted dinucleotide-binding enzyme )

Seq: JACZQG010000174.1 Escherichia coli strain 186B2 186B2_S167_R1_(paired)_contig_174, whole genome shotgun sequence (3085 bp)
Overview 1 RT 1: 1746-2900 bp Neighborhood of RT #1 [1746, 2992] RVT-GII Feature: gene Location: 1746-2423 bp Feature: gene Location: 2438-2614 bp Feature: gene Location: 2678-2992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2798-2900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 798-2 900 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JACZQG010000443.1 Escherichia coli strain 186B2 186B2_S167_R1_(paired)_contig_443, whole genome shotgun sequence (3198 bp)
Overview 1 RT 1: 155-3195 bp Neighborhood of RT #1 [155, 3195] RVT-GII RVT-GII GIIM Feature: gene Location: 155-1060 bp Feature: gene Location: 1546-2085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1876-1954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1876-1954 bp Feature: gene Location: 2113-2634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2119-2401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2119-2401 bp Feature: domain Description: GIIM Note: maturase Location: 2449-2629 bp Feature: domain Description: GIIM Note: maturase Location: 2449-2629 bp Feature: gene Location: 2733-2912 bp Feature: gene Location: 3022-3195 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACZQG010000067.1 Escherichia coli strain 186B2 186B2_S167_R1_(paired)_contig_67, whole genome shotgun sequence (47278 bp)
Overview 1 RT 1: 21466-29167 bp Neighborhood of RT #1 [21466, 29304] proA RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 21466-22719 bp Feature: domain Description: proA Location: 21493-22684 bp Feature: domain Description: proA Location: 214 93-22684 bp Feature: gene Location: 23273-23743 bp Feature: gene Location: 24090-27299 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 24618-25107 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 24 618-25107 bp Feature: domain Description: nitrilase Location: 26613-27210 bp Feature: domain Description: nitrilase Location: 26613-27210 bp Feature: gene Location: 27594-28397 bp Feature: domain Description: AbiEi_3_N Location: 27627-27888 bp Feature: domain Description: AbiEi_3_N Location: 27627-27888 bp Feature: domain Description: AbiEi_3 Location: 27900-28356 bp Feature: domain Description: AbiEi_3 Location: 27900-28356 bp Feature: gene Location: 28384-29304 bp Feature: domain Description: AbiEii Location: 28426-29167 bp Feature: domain Description: AbiEii Location: 284 26-29167 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)