myRT

myRT report for GCA_014861145.1_ASM1486114v1

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Seq: JACZQA010000043.1 (28136 bp)
Overview 1 RT 1: 20580-23494 bp Neighborhood of RT #1 [20580, 23559] RVT-GII GIIM PHA02517 Feature: gene Location: 20580-20723 bp Feature: gene Location: 20748-20951 bp Feature: gene Location: 21019-22542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21292-22024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 292-22024 bp Feature: domain Description: GIIM Note: maturase Location: 22099-22297 bp Feature: domain Description: GIIM Note: maturase Location: 22099-22297 bp Feature: gene Location: 22496-22921 bp Feature: gene Location: 23134-23559 bp Feature: domain Description: PHA02517 Location: 23158-23494 bp Feature: domain Description: PHA0251 7 Location: 231 58-23494 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: JACZQA010000087.1 (43986 bp)
Overview 1 RT 1: 1-1224 bp 2 RT 2: 36674-43680 bp Neighborhood of RT #1 [1, 1298] RVT-GII RVT-GII group_II_RT_mat IS285 Neighborhood of RT #2 [36674, 43682] HEPN_Apea GerD RVT-UG1 YeeP Feature: gene Location: 1-198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40-196 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40-196 bp Feature: gene Location: 232-468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 235-415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 35-415 bp Feature: gene Location: 461-673 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 464-662 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 464-662 bp Feature: gene Location: 816-1298 bp Feature: domain Description: IS285 Location: 846-1224 bp Feature: domain Description: IS2 85 Location: 846-12 2 4 bp Feature: gene Location: 36674-37777 bp Feature: domain Description: HEPN_Apea Location: 36746-37061 bp Feature: domain Description: HEPN_Apea Location: 36746-37061 bp Feature: gene Location: 38074-38508 bp Feature: domain Description: GerD Location: 38152-38266 bp Feature: domain Description: GerD Location: 38152 -382 66 bp Feature: gene Location: 38517-42206 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 39129-39639 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 3912 9-39639 bp Feature: gene Location: 42810-43682 bp Feature: domain Description: YeeP Location: 42813-43680 bp Feature: domain Description: YeeP Location: 42 813-43680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416), IS285 (COG3328), HEPN_Apea (pfam18739), GerD (pfam17898), RVT-UG1, YeeP (COG3596)