myRT

myRT report for GCA_014861225.1_ASM1486122v1

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Seq: JACZPX010000164.1 Escherichia coli strain 176F7 176F7_S84_R1_(paired)_contig_164, whole genome shotgun sequence (3048 bp)
Overview 1 RT 1: 94-2238 bp Neighborhood of RT #1 [94, 2238] RVT-GII Feature: gene Location: 94-408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 214-316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 4-31 6 bp Feature: gene Location: 663-1340 bp Feature: gene Location: 1870-2238 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JACZPX010000067.1 Escherichia coli strain 176F7 176F7_S84_R1_(paired)_contig_67, whole genome shotgun sequence (12068 bp)
Overview 1 RT 1: 1-2921 bp Neighborhood of RT #1 [1, 3088] RVT-GII GIIM PHA02517 COG2085 Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: gene Location: 2333-2509 bp Feature: domain Description: PHA02517 Location: 2336-2438 bp Feature: domain Description: PHA02 517 Location: 2 336-2 438 bp Feature: gene Location: 2675-3088 bp Feature: domain Description: COG2085 Location: 2774-2921 bp Feature: domain Description: COG2 085 Location: 2 774-2 92 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), COG2085 (Predicted dinucleotide-binding enzyme )

Seq: JACZPX010000071.1 Escherichia coli strain 176F7 176F7_S84_R1_(paired)_contig_71, whole genome shotgun sequence (67453 bp)
Overview 1 RT 1: 38599-42890 bp Neighborhood of RT #1 [38599, 42890] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 38599-39861 bp Feature: domain Description: YesM Location: 39112-39853 bp Feature: domain Description: YesM Location: 3 9112-3 9853 bp Feature: gene Location: 39891-40061 bp Feature: gene Location: 40411-40932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40417-40699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40417-40699 bp Feature: domain Description: GIIM Note: maturase Location: 40747-40927 bp Feature: domain Description: GIIM Note: maturase Location: 40747-40927 bp Feature: gene Location: 40960-41499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41290-41368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41290-413 68 bp Feature: gene Location: 41530-41727 bp Feature: gene Location: 41985-42890 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)

Seq: JACZPX010000092.1 Escherichia coli strain 176F7 176F7_S84_R1_(paired)_contig_92, whole genome shotgun sequence (46316 bp)
Overview 1 RT 1: 20693-28394 bp Neighborhood of RT #1 [20693, 28531] proA RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 20693-21946 bp Feature: domain Description: proA Location: 20720-21911 bp Feature: domain Description: proA Location: 20720-21911 bp Feature: gene Location: 22500-22970 bp Feature: gene Location: 23317-26526 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 23845-24334 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2384 5-24 334 bp Feature: domain Description: nitrilase Location: 25840-26437 bp Feature: domain Description: nitrilase Location: 2584 0-264 37 bp Feature: gene Location: 26821-27624 bp Feature: domain Description: AbiEi_3_N Location: 26854-27115 bp Feature: domain Description: AbiEi_3_N Location: 26854 -27115 bp Feature: domain Description: AbiEi_3 Location: 27127-27583 bp Feature: domain Description: AbiEi_3 Location: 27127-27583 bp Feature: gene Location: 27611-28531 bp Feature: domain Description: AbiEii Location: 27653-28394 bp Feature: domain Description: AbiEii Location: 27653-28394 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)