myRT

myRT report for GCA_014861945.1_ASM1486194v1

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Seq: JACZPM010000134.1 Escherichia coli strain 160G2 160G2_S53_R1_(paired)_contig_134, whole genome shotgun sequence (41676 bp)
Overview 1 RT 1: 17492-21783 bp Neighborhood of RT #1 [17492, 21783] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 17492-18754 bp Feature: domain Description: YesM Location: 18005-18746 bp Feature: domain Description: YesM Location: 1 8005-1 8746 bp Feature: gene Location: 18784-18954 bp Feature: gene Location: 19304-19825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19310-19592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 931 0-1 9592 bp Feature: domain Description: GIIM Note: maturase Location: 19640-19820 bp Feature: domain Description: GIIM Note: maturase Location: 1 9640-1 9820 bp Feature: gene Location: 19853-20392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20183-20261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201 83-20261 bp Feature: gene Location: 20423-20620 bp Feature: gene Location: 20878-21783 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)

Seq: JACZPM010000192.1 Escherichia coli strain 160G2 160G2_S53_R1_(paired)_contig_192, whole genome shotgun sequence (12047 bp)
Overview 1 RT 1: 8960-12044 bp Neighborhood of RT #1 [8960, 12044] COG2085 PHA02517 RVT-GII GIIM Feature: gene Location: 8960-9373 bp Feature: domain Description: COG2085 Location: 9059-9206 bp Feature: domain Description: COG2 085 Location: 9059-92 06 bp Feature: gene Location: 9539-9715 bp Feature: domain Description: PHA02517 Location: 9542-9644 bp Feature: domain Description: PHA02 517 Location: 9542 -9644 bp Feature: gene Location: 9868-11391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10141-10873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10141-10873 bp Feature: domain Description: GIIM Note: maturase Location: 10948-11146 bp Feature: domain Description: GIIM Note: maturase Location: 10948-11146 bp Feature: gene Location: 11685-12044 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2085 (Predicted dinucleotide-binding enzyme ), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JACZPM010000080.1 Escherichia coli strain 160G2 160G2_S53_R1_(paired)_contig_80, whole genome shotgun sequence (46344 bp)
Overview 1 RT 1: 17814-23845 bp Neighborhood of RT #1 [17814, 23845] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 17814-18734 bp Feature: domain Description: AbiEii Location: 17856-18597 bp Feature: domain Description: AbiEii Location: 17856-18597 bp Feature: gene Location: 18721-19524 bp Feature: domain Description: AbiEi_3_N Location: 18754-19015 bp Feature: domain Description: AbiEi_3 _N Location: 18754-19015 bp Feature: domain Description: AbiEi_3 Location: 19027-19483 bp Feature: domain Description: AbiEi_3 Location: 19027-19483 bp Feature: gene Location: 19819-23028 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 20347-20836 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 203 47-2083 6 bp Feature: domain Description: nitrilase Location: 22342-22939 bp Feature: domain Description: nitrilase Location: 223 42-2293 9 bp Feature: gene Location: 23189-23329 bp Feature: domain Description: Phage_ASH Location: 23216-23309 bp Feature: domain Description: Phage_ASH Location: 23 216-23 3 09 bp Feature: gene Location: 23375-23845 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)