myRT

myRT report for GCA_014862005.1_ASM1486200v1

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Seq: JACZPJ010000100.1 Escherichia coli strain 157F3 157F3CEPHYTEN187_S6_R1.flt_(paired)_contig_100, whole genome shotgun sequence (15524 bp)
Overview 1 RT 1: 9400-12179 bp Neighborhood of RT #1 [9400, 12244] RVT-GII GIIM PHA02517 Feature: gene Location: 9400-9543 bp Feature: gene Location: 9568-9771 bp Feature: gene Location: 9839-11362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10112-10844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 1 2-1 0844 bp Feature: domain Description: GIIM Note: maturase Location: 10919-11117 bp Feature: domain Description: GIIM Note: maturase Location: 1 091 9-1 1 1 1 7 bp Feature: gene Location: 11316-11741 bp Feature: gene Location: 11954-12244 bp Feature: domain Description: PHA02517 Location: 11960-12179 bp Feature: domain Description: PHA0251 7 Location: 1 1 960-1 21 79 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: JACZPJ010000118.1 Escherichia coli strain 157F3 157F3CEPHYTEN187_S6_R1.flt_(paired)_contig_118, whole genome shotgun sequence (46359 bp)
Overview 1 RT 1: 17829-23860 bp Neighborhood of RT #1 [17829, 23860] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 17829-18749 bp Feature: domain Description: AbiEii Location: 17871-18612 bp Feature: domain Description: AbiEii Location: 17871-18612 bp Feature: gene Location: 18736-19539 bp Feature: domain Description: AbiEi_3_N Location: 18769-19030 bp Feature: domain Description: AbiEi_3_N Location: 18769-19030 bp Feature: domain Description: AbiEi_3 Location: 19042-19498 bp Feature: domain Description: AbiEi_3 Location: 19042 -19498 bp Feature: gene Location: 19834-23043 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 20362-20851 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 0362 -2 0851 bp Feature: domain Description: nitrilase Location: 22357-22954 bp Feature: domain Description: nitrilase Location: 2 2 357-2 2 954 bp Feature: gene Location: 23204-23344 bp Feature: domain Description: Phage_ASH Location: 23231-23324 bp Feature: domain Description: Phage_ASH Location: 2 32 31-2 332 4 bp Feature: gene Location: 23390-23860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: JACZPJ010000020.1 Escherichia coli strain 157F3 157F3CEPHYTEN187_S6_R1.flt_(paired)_contig_20, whole genome shotgun sequence (22109 bp)
Overview 1 RT 1: 176-2655 bp Neighborhood of RT #1 [176, 2655] RVT-GII GIIM RVT-GII Feature: gene Location: 176-697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 182-464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 182-464 bp Feature: domain Description: GIIM Note: maturase Location: 512-692 bp Feature: domain Description: GIIM Note: maturase Location: 512-692 bp Feature: gene Location: 725-1264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1055-1133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1055-113 3 bp Feature: gene Location: 1295-1492 bp Feature: gene Location: 1750-2655 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)