myRT

myRT report for GCA_014862065.1_ASM1486206v1

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Seq: JACZPG010000136.1 Escherichia coli strain 147F5 147F5CEPHYTEN184_S3_R1.flt_(paired)_contig_136, whole genome shotgun sequence (16699 bp)
Overview 1 RT 1: 8826-11740 bp Neighborhood of RT #1 [8826, 11805] RVT-GII GIIM PHA02517 Feature: gene Location: 8826-8969 bp Feature: gene Location: 8994-9197 bp Feature: gene Location: 9265-10788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9538-10270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9538-1 0270 bp Feature: domain Description: GIIM Note: maturase Location: 10345-10543 bp Feature: domain Description: GIIM Note: maturase Location: 1 0345-1 0543 bp Feature: gene Location: 10742-11167 bp Feature: gene Location: 11380-11805 bp Feature: domain Description: PHA02517 Location: 11404-11740 bp Feature: domain Description: PHA0251 7 Location: 1 1 404-1 1 740 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: JACZPG010000025.1 Escherichia coli strain 147F5 147F5CEPHYTEN184_S3_R1.flt_(paired)_contig_25, whole genome shotgun sequence (131195 bp)
Overview 1 RT 1: 22151-28394 bp Neighborhood of RT #1 [22151, 28531] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 22151-22417 bp Feature: domain Description: Phage_integrase Location: 22217-22313 bp Feature: domain Description: Phage_integrase Location: 2 2 2 17-2 2 313 bp Feature: gene Location: 22500-22970 bp Feature: gene Location: 23317-26526 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 23845-24334 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 3845-2 4334 bp Feature: domain Description: nitrilase Location: 25840-26437 bp Feature: domain Description: nitrilase Location: 2 5840-2 6437 bp Feature: gene Location: 26821-27624 bp Feature: domain Description: AbiEi_3_N Location: 26854-27115 bp Feature: domain Description: AbiEi_3_N Location: 2 6854-2 7115 bp Feature: domain Description: AbiEi_3 Location: 27127-27583 bp Feature: domain Description: AbiEi_3 Location: 2 712 7-2 7583 bp Feature: gene Location: 27611-28531 bp Feature: domain Description: AbiEii Location: 27653-28394 bp Feature: domain Description: AbiEii Location: 2 7653-2 8394 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: JACZPG010000087.1 Escherichia coli strain 147F5 147F5CEPHYTEN184_S3_R1.flt_(paired)_contig_87, whole genome shotgun sequence (42252 bp)
Overview 1 RT 1: 18059-22350 bp Neighborhood of RT #1 [18059, 22350] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 18059-19321 bp Feature: domain Description: YesM Location: 18572-19313 bp Feature: domain Description: YesM Location: 18572-193 13 bp Feature: gene Location: 19351-19521 bp Feature: gene Location: 19871-20392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19877-20159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19877-20159 bp Feature: domain Description: GIIM Note: maturase Location: 20207-20387 bp Feature: domain Description: GIIM Note: maturase Location: 20207-203 87 bp Feature: gene Location: 20420-20959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20750-20828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20750-20828 bp Feature: gene Location: 20990-21187 bp Feature: gene Location: 21445-22350 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)