myRT

myRT report for GCA_014862395.1_ASM1486239v1

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Seq: JACZOR010000002.1 Escherichia coli strain 120E4 120E4CEPHYTEN174_S1_R1.flt_(paired)_contig_2, whole genome shotgun sequence (110645 bp)
Overview 1 RT 1: 22151-28394 bp Neighborhood of RT #1 [22151, 28531] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 22151-22417 bp Feature: domain Description: Phage_integrase Location: 22217-22313 bp Feature: domain Description: Phage_integrase Location: 2221 7-2231 3 bp Feature: gene Location: 22500-22970 bp Feature: gene Location: 23317-26526 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 23845-24334 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 23845-24334 bp Feature: domain Description: nitrilase Location: 25840-26437 bp Feature: domain Description: nitrilase Location: 25840-26437 bp Feature: gene Location: 26821-27624 bp Feature: domain Description: AbiEi_3_N Location: 26854-27115 bp Feature: domain Description: AbiEi_3_N Location: 26854-271 1 5 bp Feature: domain Description: AbiEi_3 Location: 27127-27583 bp Feature: domain Description: AbiEi_3 Location: 271 27-27583 bp Feature: gene Location: 27611-28531 bp Feature: domain Description: AbiEii Location: 27653-28394 bp Feature: domain Description: AbiEii Location: 27653-28394 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: JACZOR010000029.1 Escherichia coli strain 120E4 120E4CEPHYTEN174_S1_R1.flt_(paired)_contig_29, whole genome shotgun sequence (65246 bp)
Overview 1 RT 1: 37618-40683 bp Neighborhood of RT #1 [37618, 40683] RVT-GII GIIM RVT-GII Feature: gene Location: 37618-37788 bp Feature: gene Location: 37926-38105 bp Feature: gene Location: 38204-38725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38210-38492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 382 10-38492 bp Feature: domain Description: GIIM Note: maturase Location: 38540-38720 bp Feature: domain Description: GIIM Note: maturase Location: 38540-3872 0 bp Feature: gene Location: 38753-39292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39083-39161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39083-39161 bp Feature: gene Location: 39323-39520 bp Feature: gene Location: 39778-40683 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACZOR010000081.1 Escherichia coli strain 120E4 120E4CEPHYTEN174_S1_R1.flt_(paired)_contig_81, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 0-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 173 7-193 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)