myRT

myRT report for GCA_014862515.1_ASM1486251v1

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Seq: JACZOK010000117.1 Escherichia coli strain 226I3 226I3CEPHYTEN191_S13_R1.flt_(paired)_contig_117, whole genome shotgun sequence (17743 bp)
Overview 1 RT 1: 14656-17740 bp Neighborhood of RT #1 [14656, 17740] COG2085 PHA02517 RVT-GII GIIM Feature: gene Location: 14656-15069 bp Feature: domain Description: COG2085 Location: 14755-14902 bp Feature: domain Description: COG2085 Location: 1 4755-1 4902 bp Feature: gene Location: 15235-15411 bp Feature: domain Description: PHA02517 Location: 15238-15340 bp Feature: domain Description: PHA0251 7 Location: 1 5238-1 5340 bp Feature: gene Location: 15564-17087 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15837-16569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5837-1 6569 bp Feature: domain Description: GIIM Note: maturase Location: 16644-16842 bp Feature: domain Description: GIIM Note: maturase Location: 1 6644-1 6842 bp Feature: gene Location: 17381-17740 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2085 (Predicted dinucleotide-binding enzyme ), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JACZOK010000030.1 Escherichia coli strain 226I3 226I3CEPHYTEN191_S13_R1.flt_(paired)_contig_30, whole genome shotgun sequence (110626 bp)
Overview 1 RT 1: 22151-28394 bp Neighborhood of RT #1 [22151, 28531] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 22151-22417 bp Feature: domain Description: Phage_integrase Location: 22217-22313 bp Feature: domain Description: Phage_integrase Location: 2 2 2 17-2 2 313 bp Feature: gene Location: 22500-22970 bp Feature: gene Location: 23317-26526 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 23845-24334 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 3845-2 4334 bp Feature: domain Description: nitrilase Location: 25840-26437 bp Feature: domain Description: nitrilase Location: 2 5840-2 6437 bp Feature: gene Location: 26821-27624 bp Feature: domain Description: AbiEi_3_N Location: 26854-27115 bp Feature: domain Description: AbiEi_3_N Location: 2 6854-2 7115 bp Feature: domain Description: AbiEi_3 Location: 27127-27583 bp Feature: domain Description: AbiEi_3 Location: 2 712 7-2 7583 bp Feature: gene Location: 27611-28531 bp Feature: domain Description: AbiEii Location: 27653-28394 bp Feature: domain Description: AbiEii Location: 2 7653-2 8394 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: JACZOK010000032.1 Escherichia coli strain 226I3 226I3CEPHYTEN191_S13_R1.flt_(paired)_contig_32, whole genome shotgun sequence (35422 bp)
Overview 1 RT 1: 24666-27721 bp Neighborhood of RT #1 [24666, 27721] RVT-GII RVT-GII GIIM Feature: gene Location: 24666-25571 bp Feature: gene Location: 25709-25900 bp Feature: gene Location: 26057-26596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26387-26465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 263 87-26465 bp Feature: gene Location: 26624-27145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26630-26912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2663 0-26912 bp Feature: domain Description: GIIM Note: maturase Location: 26960-27140 bp Feature: domain Description: GIIM Note: maturase Location: 26960-27140 bp Feature: gene Location: 27244-27423 bp Feature: gene Location: 27533-27721 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)