myRT

myRT report for GCA_014862585.1_ASM1486258v1

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Seq: JACZOI010000259.1 Escherichia coli strain 225E3 225E3CEPHYTEN189_S11_R1.flt_(paired)_contig_259, whole genome shotgun sequence (1437 bp)
Overview 1 RT 1: 1-1435 bp Neighborhood of RT #1 [1, 1435] RVT-Retrons CspC Feature: gene Location: 1-894 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 22-454 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 22-454 bp Feature: gene Location: 899-1102 bp Feature: domain Description: CspC Location: 902-1097 bp Feature: domain Description: CspC Location: 902-1 097 bp Feature: gene Location: 1301-1435 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, CspC (COG1278)

Seq: JACZOI010000538.1 Escherichia coli strain 225E3 225E3CEPHYTEN189_S11_R1.flt_(paired)_contig_538, whole genome shotgun sequence (789 bp)
Overview 1 RT 1: 1-616 bp Neighborhood of RT #1 [1, 618] RVT-GII Feature: gene Location: 1-618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 454-616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 454-616 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JACZOI010000631.1 Escherichia coli strain 225E3 225E3CEPHYTEN189_S11_R1.flt_(paired)_contig_631, whole genome shotgun sequence (788 bp)
Overview 1 RT 1: 1-775 bp Neighborhood of RT #1 [1, 786] RVT-GII GIIM Feature: gene Location: 1-786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-493 bp Feature: domain Description: GIIM Note: maturase Location: 583-775 bp Feature: domain Description: GIIM Note: maturase Location: 583 -775 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACZOI010000657.1 Escherichia coli strain 225E3 225E3CEPHYTEN189_S11_R1.flt_(paired)_contig_657, whole genome shotgun sequence (665 bp)
Overview 1 RT 1: 2-350 bp Neighborhood of RT #1 [2, 664] RVT-UG17 Feature: gene Location: 2-664 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 5-350 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 5-350 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17

Seq: JACZOI010000728.1 Escherichia coli strain 225E3 225E3CEPHYTEN189_S11_R1.flt_(paired)_contig_728, whole genome shotgun sequence (866 bp)
Overview 1 RT 1: 1-732 bp Neighborhood of RT #1 [1, 863] RVT-GII Feature: gene Location: 1-276 bp Feature: gene Location: 558-863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 654-732 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65 4-732 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII