myRT

myRT report for GCA_014862805.1_ASM1486280v1

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Seq: JACZNW010000109.1 Escherichia coli strain 213I3 213I3CEPHYTEN178_S158_R1.flt_(paired)_contig_109, whole genome shotgun sequence (15055 bp)
Overview 1 RT 1: 12437-15052 bp Neighborhood of RT #1 [12437, 15052] RVT-GII GIIM Feature: gene Location: 12437-12580 bp Feature: gene Location: 12605-12808 bp Feature: gene Location: 12876-14399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13149-13881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 49-1 3881 bp Feature: domain Description: GIIM Note: maturase Location: 13956-14154 bp Feature: domain Description: GIIM Note: maturase Location: 1 3956-1 41 54 bp Feature: gene Location: 14693-15052 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACZNW010000003.1 Escherichia coli strain 213I3 213I3CEPHYTEN178_S158_R1.flt_(paired)_contig_3, whole genome shotgun sequence (50168 bp)
Overview 1 RT 1: 24564-27619 bp Neighborhood of RT #1 [24564, 27619] RVT-GII RVT-GII GIIM Feature: gene Location: 24564-25469 bp Feature: gene Location: 25727-25924 bp Feature: gene Location: 25955-26494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26285-26363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 62 85-2 6363 bp Feature: gene Location: 26522-27043 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26528-26810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 652 8-2 6810 bp Feature: domain Description: GIIM Note: maturase Location: 26858-27038 bp Feature: domain Description: GIIM Note: maturase Location: 2 6858-2 7038 bp Feature: gene Location: 27142-27321 bp Feature: gene Location: 27431-27619 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACZNW010000041.1 Escherichia coli strain 213I3 213I3CEPHYTEN178_S158_R1.flt_(paired)_contig_41, whole genome shotgun sequence (110645 bp)
Overview 1 RT 1: 82115-88146 bp Neighborhood of RT #1 [82115, 88146] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 82115-83035 bp Feature: domain Description: AbiEii Location: 82157-82898 bp Feature: domain Description: AbiEii Location: 82157-82898 bp Feature: gene Location: 83022-83825 bp Feature: domain Description: AbiEi_3_N Location: 83055-83316 bp Feature: domain Description: AbiEi_3 _N Location: 83 055-83 3 16 bp Feature: domain Description: AbiEi_3 Location: 83328-83784 bp Feature: domain Description: AbiEi_3 Location: 83 3 28-83 784 bp Feature: gene Location: 84120-87329 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 84648-85137 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 84648-8513 7 bp Feature: domain Description: nitrilase Location: 86643-87240 bp Feature: domain Description: nitrilase Location: 86643 -87240 bp Feature: gene Location: 87490-87630 bp Feature: domain Description: Phage_ASH Location: 87517-87610 bp Feature: domain Description: Phage_ASH Location: 87517-87610 bp Feature: gene Location: 87676-88146 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)