myRT

myRT report for GCA_014862815.1_ASM1486281v1

Download annotations/find similar RTs

Seq: JACZNU010000029.1 Escherichia coli strain 212D5 212D5CEPHYTEN176_S156_R1.flt_(paired)_contig_29, whole genome shotgun sequence (17786 bp)
Overview 1 RT 1: 1-2921 bp Neighborhood of RT #1 [1, 3088] RVT-GII GIIM PHA02517 COG2085 Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1 662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1 737-1 935 bp Feature: gene Location: 2333-2509 bp Feature: domain Description: PHA02517 Location: 2336-2438 bp Feature: domain Description: PHA0251 7 Location: 2336-2438 bp Feature: gene Location: 2675-3088 bp Feature: domain Description: COG2085 Location: 2774-2921 bp Feature: domain Description: COG2085 Location: 2774-2921 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), COG2085 (Predicted dinucleotide-binding enzyme )

Seq: JACZNU010000039.1 Escherichia coli strain 212D5 212D5CEPHYTEN176_S156_R1.flt_(paired)_contig_39, whole genome shotgun sequence (65292 bp)
Overview 1 RT 1: 37664-40729 bp Neighborhood of RT #1 [37664, 40729] RVT-GII GIIM RVT-GII Feature: gene Location: 37664-37834 bp Feature: gene Location: 37972-38151 bp Feature: gene Location: 38250-38771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38256-38538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 382 56-38538 bp Feature: domain Description: GIIM Note: maturase Location: 38586-38766 bp Feature: domain Description: GIIM Note: maturase Location: 38586-38766 bp Feature: gene Location: 38799-39338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39129-39207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3912 9-392 07 bp Feature: gene Location: 39369-39566 bp Feature: gene Location: 39824-40729 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACZNU010000049.1 Escherichia coli strain 212D5 212D5CEPHYTEN176_S156_R1.flt_(paired)_contig_49, whole genome shotgun sequence (165923 bp)
Overview 1 RT 1: 137393-143424 bp Neighborhood of RT #1 [137393, 143424] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 137393-138313 bp Feature: domain Description: AbiEii Location: 137435-138176 bp Feature: domain Description: AbiEii Location: 13 743 5-13 8176 bp Feature: gene Location: 138300-139103 bp Feature: domain Description: AbiEi_3_N Location: 138333-138594 bp Feature: domain Description: AbiEi_3 _N Location: 13 83 3 3 -13 8594 bp Feature: domain Description: AbiEi_3 Location: 138606-139062 bp Feature: domain Description: AbiEi_3 Location: 13 8606-13 9062 bp Feature: gene Location: 139398-142607 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 139926-140415 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 13 9926-140415 bp Feature: domain Description: nitrilase Location: 141921-142518 bp Feature: domain Description: nitrilase Location: 141921-142518 bp Feature: gene Location: 142768-142908 bp Feature: domain Description: Phage_ASH Location: 142795-142888 bp Feature: domain Description: Phage_ASH Location: 142795-142888 bp Feature: gene Location: 142954-143424 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)