myRT

myRT report for GCA_014862945.1_ASM1486294v1

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Seq: JACZNQ010000143.1 (13166 bp)
Overview 1 RT 1: 7087-10960 bp Neighborhood of RT #1 [7087, 11331] SLATT_5 RVT-UG17 Caudo_TAP Macro_Appr_pase Feature: gene Location: 7087-7263 bp Feature: gene Location: 7671-8375 bp Feature: domain Description: SLATT_5 Location: 7833-8343 bp Feature: domain Description: SLATT_5 Location: 7833-8343 bp Feature: gene Location: 8353-9723 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 8581-9187 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 8581 -91 87 bp Feature: gene Location: 9836-10420 bp Feature: domain Description: Caudo_TAP Location: 10052-10409 bp Feature: domain Description: Caudo_TAP Location: 1 0052-1 0409 bp Feature: gene Location: 10429-11331 bp Feature: domain Description: Macro_Appr_pase Location: 10447-10960 bp Feature: domain Description: Macro_Appr_pase Location: 1 0447-1 0960 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, Caudo_TAP (pfam02413), Macro_Appr_pase (cd02900)

Seq: JACZNQ010000022.1 (95949 bp)
Overview 1 RT 1: 28072-32013 bp Neighborhood of RT #1 [28072, 32013] RVT-Retrons Feature: gene Location: 28072-28311 bp Feature: gene Location: 28618-28794 bp Feature: gene Location: 28867-30639 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29026-29644 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 902 6-2 9644 bp Feature: gene Location: 30661-30828 bp Feature: gene Location: 30874-32013 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: JACZNQ010000052.1 (13741 bp)
Overview 1 RT 1: 11-3329 bp Neighborhood of RT #1 [11, 3382] RVT-GII GIIM PHA02517 autotrans_barl Feature: gene Location: 11-382 bp Feature: gene Location: 676-2199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 949-1681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 949-1681 bp Feature: domain Description: GIIM Note: maturase Location: 1756-1954 bp Feature: domain Description: GIIM Note: maturase Location: 1756-1954 bp Feature: gene Location: 2376-2762 bp Feature: domain Description: PHA02517 Location: 2379-2760 bp Feature: domain Description: PHA02517 Location: 23 79-2760 bp Feature: gene Location: 2765-3382 bp Feature: domain Description: autotrans_barl Location: 2888-3329 bp Feature: domain Description: autotrans_barl Location: 2888-3 3 29 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), autotrans_barl (TIGR01414)

Seq: JACZNQ010000003.1 (80353 bp)
Overview 1 RT 1: 57348-61484 bp Neighborhood of RT #1 [57348, 61484] DUF905 PRK13732 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 57348-57581 bp Feature: domain Description: DUF905 Location: 57378-57576 bp Feature: domain Description: DUF905 Location: 57378-57576 bp Feature: gene Location: 57649-58101 bp Feature: domain Description: PRK13732 Location: 57655-58099 bp Feature: domain Description: PRK13732 Location: 57655-58099 bp Feature: gene Location: 58296-60197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58563-59394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58563-59394 bp Feature: domain Description: Intron_maturas2 Location: 59508-59766 bp Feature: domain Description: Intron_maturas2 Location: 59508-59766 bp Feature: domain Description: HNHc Note: nucleases Location: 59940-60102 bp Feature: domain Description: HNHc Note: nucleases Location: 5994 0-60102 bp Feature: gene Location: 60939-61142 bp Feature: gene Location: 61194-61484 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), PRK13732 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)