myRT

myRT report for GCA_014862955.1_ASM1486295v1

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Seq: JACZNP010000106.1 Escherichia coli strain 206I6 206I6CEPHYTEN171_S151_R1.flt_(paired)_contig_106, whole genome shotgun sequence (3636 bp)
Overview 1 RT 1: 2174-3328 bp Neighborhood of RT #1 [2174, 3420] RVT-GII Feature: gene Location: 2174-2851 bp Feature: gene Location: 2866-3042 bp Feature: gene Location: 3106-3420 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3226-3328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3226-3328 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JACZNP010000156.1 Escherichia coli strain 206I6 206I6CEPHYTEN171_S151_R1.flt_(paired)_contig_156, whole genome shotgun sequence (17458 bp)
Overview 1 RT 1: 1-2921 bp Neighborhood of RT #1 [1, 3088] RVT-GII GIIM PHA02517 COG2085 Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: gene Location: 2333-2509 bp Feature: domain Description: PHA02517 Location: 2336-2438 bp Feature: domain Description: PHA02 517 Location: 2 336-2 438 bp Feature: gene Location: 2675-3088 bp Feature: domain Description: COG2085 Location: 2774-2921 bp Feature: domain Description: COG2 085 Location: 2 774-2 92 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), COG2085 (Predicted dinucleotide-binding enzyme )

Seq: JACZNP010000023.1 Escherichia coli strain 206I6 206I6CEPHYTEN171_S151_R1.flt_(paired)_contig_23, whole genome shotgun sequence (37913 bp)
Overview 1 RT 1: 10285-13350 bp Neighborhood of RT #1 [10285, 13350] RVT-GII GIIM RVT-GII Feature: gene Location: 10285-10455 bp Feature: gene Location: 10593-10772 bp Feature: gene Location: 10871-11392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10877-11159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10877-11159 bp Feature: domain Description: GIIM Note: maturase Location: 11207-11387 bp Feature: domain Description: GIIM Note: maturase Location: 11207-113 87 bp Feature: gene Location: 11420-11959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11750-11828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11750-11828 bp Feature: gene Location: 11990-12187 bp Feature: gene Location: 12445-13350 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JACZNP010000031.1 Escherichia coli strain 206I6 206I6CEPHYTEN171_S151_R1.flt_(paired)_contig_31, whole genome shotgun sequence (110880 bp)
Overview 1 RT 1: 82115-88146 bp Neighborhood of RT #1 [82115, 88146] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 82115-83035 bp Feature: domain Description: AbiEii Location: 82157-82898 bp Feature: domain Description: AbiEii Location: 82157-82898 bp Feature: gene Location: 83022-83825 bp Feature: domain Description: AbiEi_3_N Location: 83055-83316 bp Feature: domain Description: AbiEi_3_N Location: 83055-83316 bp Feature: domain Description: AbiEi_3 Location: 83328-83784 bp Feature: domain Description: AbiEi_3 Location: 83328-83784 bp Feature: gene Location: 84120-87329 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 84648-85137 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 84 64 8-85137 bp Feature: domain Description: nitrilase Location: 86643-87240 bp Feature: domain Description: nitrilase Location: 8664 3-8724 0 bp Feature: gene Location: 87490-87630 bp Feature: domain Description: Phage_ASH Location: 87517-87610 bp Feature: domain Description: Phage_ASH Location: 87517-87610 bp Feature: gene Location: 87676-88146 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)