myRT

myRT report for GCA_014862965.1_ASM1486296v1

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Seq: JACZNO010000126.1 Escherichia coli strain 204I1 204I1CEPHYTEN170_S150_R1.flt_(paired)_contig_126, whole genome shotgun sequence (17743 bp)
Overview 1 RT 1: 1-2921 bp Neighborhood of RT #1 [1, 3088] RVT-GII GIIM PHA02517 COG2085 Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1 662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1 737-1 935 bp Feature: gene Location: 2333-2509 bp Feature: domain Description: PHA02517 Location: 2336-2438 bp Feature: domain Description: PHA0251 7 Location: 2336-2438 bp Feature: gene Location: 2675-3088 bp Feature: domain Description: COG2085 Location: 2774-2921 bp Feature: domain Description: COG2085 Location: 2774-2921 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), COG2085 (Predicted dinucleotide-binding enzyme )

Seq: JACZNO010000136.1 Escherichia coli strain 204I1 204I1CEPHYTEN170_S150_R1.flt_(paired)_contig_136, whole genome shotgun sequence (3855 bp)
Overview 1 RT 1: 94-2238 bp Neighborhood of RT #1 [94, 2238] RVT-GII Feature: gene Location: 94-408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 214-316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 14-316 bp Feature: gene Location: 663-1340 bp Feature: gene Location: 1870-2238 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JACZNO010000039.1 Escherichia coli strain 204I1 204I1CEPHYTEN170_S150_R1.flt_(paired)_contig_39, whole genome shotgun sequence (110645 bp)
Overview 1 RT 1: 82115-88146 bp Neighborhood of RT #1 [82115, 88146] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 82115-83035 bp Feature: domain Description: AbiEii Location: 82157-82898 bp Feature: domain Description: AbiEii Location: 82157-82898 bp Feature: gene Location: 83022-83825 bp Feature: domain Description: AbiEi_3_N Location: 83055-83316 bp Feature: domain Description: AbiEi_3 _N Location: 83 055-83 3 16 bp Feature: domain Description: AbiEi_3 Location: 83328-83784 bp Feature: domain Description: AbiEi_3 Location: 83 3 28-83 784 bp Feature: gene Location: 84120-87329 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 84648-85137 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 84648-8513 7 bp Feature: domain Description: nitrilase Location: 86643-87240 bp Feature: domain Description: nitrilase Location: 86643 -87240 bp Feature: gene Location: 87490-87630 bp Feature: domain Description: Phage_ASH Location: 87517-87610 bp Feature: domain Description: Phage_ASH Location: 87517-87610 bp Feature: gene Location: 87676-88146 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: JACZNO010000099.1 Escherichia coli strain 204I1 204I1CEPHYTEN170_S150_R1.flt_(paired)_contig_99, whole genome shotgun sequence (53254 bp)
Overview 1 RT 1: 25659-28691 bp Neighborhood of RT #1 [25659, 28691] RVT-GII GIIM RVT-GII Feature: gene Location: 25659-25829 bp Feature: gene Location: 25967-26113 bp Feature: gene Location: 26212-26733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26218-26500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26218-26500 bp Feature: domain Description: GIIM Note: maturase Location: 26548-26728 bp Feature: domain Description: GIIM Note: maturase Location: 2654 8-26728 bp Feature: gene Location: 26761-27300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27091-27169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27091-27169 bp Feature: gene Location: 27331-27528 bp Feature: gene Location: 27786-28691 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)