myRT

myRT report for GCA_014863345.1_ASM1486334v1

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Seq: JACZMT010000011.1 Escherichia coli strain 193F2 193F2_S72_R1_(paired)_contig_11, whole genome shotgun sequence (49778 bp)
Overview 1 RT 1: 21248-27279 bp Neighborhood of RT #1 [21248, 27279] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 21248-22168 bp Feature: domain Description: AbiEii Location: 21290-22031 bp Feature: domain Description: AbiEii Location: 21 290-22031 bp Feature: gene Location: 22155-22958 bp Feature: domain Description: AbiEi_3_N Location: 22188-22449 bp Feature: domain Description: AbiEi_3_N Location: 221 88-22449 bp Feature: domain Description: AbiEi_3 Location: 22461-22917 bp Feature: domain Description: AbiEi_3 Location: 22461 -2291 7 bp Feature: gene Location: 23253-26462 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 23781-24270 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 23781 -24270 bp Feature: domain Description: nitrilase Location: 25776-26373 bp Feature: domain Description: nitrilase Location: 25776-26373 bp Feature: gene Location: 26623-26763 bp Feature: domain Description: Phage_ASH Location: 26650-26743 bp Feature: domain Description: Phage_ASH Location: 26650-26743 bp Feature: gene Location: 26809-27279 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: JACZMT010000005.1 Escherichia coli strain 193F2 193F2_S72_R1_(paired)_contig_5, whole genome shotgun sequence (35137 bp)
Overview 1 RT 1: 6225-10574 bp Neighborhood of RT #1 [6225, 10574] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 6225-7487 bp Feature: domain Description: YesM Location: 6738-7479 bp Feature: domain Description: YesM Location: 6738-7479 bp Feature: gene Location: 7517-7687 bp Feature: gene Location: 8095-8616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8101-8383 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8101-8383 bp Feature: domain Description: GIIM Note: maturase Location: 8431-8611 bp Feature: domain Description: GIIM Note: maturase Location: 8431-8611 bp Feature: gene Location: 8644-9183 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8974-9052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8974-9052 bp Feature: gene Location: 9214-9411 bp Feature: gene Location: 9669-10574 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)

Seq: JACZMT010000068.1 Escherichia coli strain 193F2 193F2_S72_R1_(paired)_contig_68, whole genome shotgun sequence (17743 bp)
Overview 1 RT 1: 14656-17740 bp Neighborhood of RT #1 [14656, 17740] COG2085 PHA02517 RVT-GII GIIM Feature: gene Location: 14656-15069 bp Feature: domain Description: COG2085 Location: 14755-14902 bp Feature: domain Description: COG2085 Location: 14755-14902 bp Feature: gene Location: 15235-15411 bp Feature: domain Description: PHA02517 Location: 15238-15340 bp Feature: domain Description: PHA02517 Location: 1523 8-153 40 bp Feature: gene Location: 15564-17087 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15837-16569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1583 7-16569 bp Feature: domain Description: GIIM Note: maturase Location: 16644-16842 bp Feature: domain Description: GIIM Note: maturase Location: 16644-16842 bp Feature: gene Location: 17381-17740 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2085 (Predicted dinucleotide-binding enzyme ), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)