myRT

myRT report for GCA_014871005.1_ASM1487100v1

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Seq: WGTS01000016.1 (119520 bp)
Overview 1 RT 1: 22118-29253 bp Neighborhood of RT #1 [22118, 29253] AAA_21 AAA_21 HNH RVT-UG12 Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Feature: gene Location: 22118-24217 bp Feature: domain Description: AAA_21 Location: 22379-22436 bp Feature: domain Description: AAA_21 Location: 22379-22436 bp Feature: domain Description: AAA_21 Location: 23657-23936 bp Feature: domain Description: AAA_21 Location: 23657-23936 bp Feature: gene Location: 24230-25249 bp Feature: domain Description: HNH Note: nucleases Location: 24656-24809 bp Feature: domain Description: HNH Note: nucleases Location: 24656-24809 bp Feature: gene Location: 25409-27445 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 25844-26333 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 25844-26333 bp Feature: gene Location: 27614-28837 bp Feature: domain Description: Arm-DNA-bind_5 Location: 27644-27881 bp Feature: domain Description: Arm-DNA-bind_5 Location: 27644-27881 bp Feature: domain Description: Phage_int_SAM_5 Location: 27944-28247 bp Feature: domain Description: Phage_int_SAM_5 Location: 27944-28247 bp Feature: domain Description: INTN1_C_like Location: 28301-28787 bp Feature: domain Description: INTN1 _C_like Location: 28301 -28787 bp Feature: gene Location: 29062-29253 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_21 (pfam13304), HNH (pfam01844), RVT-UG12, Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185)

Seq: WGTS01000002.1 (282400 bp)
Overview 1 RT 1: 47194-50631 bp Neighborhood of RT #1 [47194, 50631] RVT-DGRs Feature: gene Location: 47194-48621 bp Feature: gene Location: 48652-48801 bp Feature: gene Location: 48919-49959 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 49129-49753 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4912 9-49753 bp Feature: gene Location: 49940-50317 bp Feature: gene Location: 50317-50631 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: WGTS01000003.1 (234251 bp)
Overview 1 RT 1: 105246-108843 bp Neighborhood of RT #1 [105246, 108843] COG2865 RVT_N RVT-GII GIIM Feature: gene Location: 105246-105617 bp Feature: domain Description: COG2865 Location: 105330-105594 bp Feature: domain Description: COG2865 Location: 1053 3 0-105594 bp Feature: gene Location: 105918-106136 bp Feature: gene Location: 106255-107916 bp Feature: domain Description: RVT_N Location: 106309-106552 bp Feature: domain Description: RVT_N Location: 1063 09-106552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106597-107245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106597-107245 bp Feature: domain Description: GIIM Note: maturase Location: 107296-107530 bp Feature: domain Description: GIIM Note: maturase Location: 107296-10753 0 bp Feature: gene Location: 108242-108547 bp Feature: gene Location: 108649-108843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2865 (Predicted transcriptional regulator, contains HTH domain ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)