myRT

myRT report for GCA_014871015.1_ASM1487101v1

Download annotations/find similar RTs

Seq: WGTT01000139.1 (2766 bp)
Overview 1 RT 1: 92-2763 bp Neighborhood of RT #1 [92, 2763] RVT-GII Feature: gene Location: 92-430 bp Feature: gene Location: 589-834 bp Feature: gene Location: 924-2219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1179-1869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 79-1 869 bp Feature: gene Location: 2467-2763 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WGTT01000152.1 (1989 bp)
Overview 1 RT 1: 1-1923 bp Neighborhood of RT #1 [1, 1988] RVT-GII GAF Feature: gene Location: 1-1041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319-943 bp Feature: gene Location: 1413-1619 bp Feature: gene Location: 1800-1988 bp Feature: domain Description: GAF Location: 1803-1923 bp Feature: domain Description: GAF Location: 1803-192 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GAF (smart00065)

Seq: WGTT01000141.1 (2681 bp)
Overview 1 RT 1: 681-2674 bp Neighborhood of RT #1 [681, 2679] RVT-GII Phage_int_SAM_1 INT_RitA_C_like Feature: gene Location: 681-1472 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1035-1419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103 5-1419 bp Feature: gene Location: 1588-2679 bp Feature: domain Description: Phage_int_SAM_1 Location: 1942-2164 bp Feature: domain Description: Phage_int_SAM_1 Location: 1942-2164 bp Feature: domain Description: INT_RitA_C_like Location: 2257-2674 bp Feature: domain Description: INT_RitA_C_like Location: 2257-2674 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188)

Seq: WGTT01000138.1 (2786 bp)
Overview 1 RT 1: 507-2530 bp Neighborhood of RT #1 [507, 2530] COG1895 RVT-GII GIIM Feature: gene Location: 507-728 bp Feature: domain Description: COG1895 Location: 516-690 bp Feature: domain Description: COG1895 Location: 516-690 bp Feature: gene Location: 910-2187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1123-1738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1123-1738 bp Feature: domain Description: GIIM Note: maturase Location: 1804-2026 bp Feature: domain Description: GIIM Note: maturase Location: 1804 -2026 bp Feature: gene Location: 2381-2530 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG1895 (Uncharacterized protein, contains HEPN domain, UPF0332 family ), RVT-GII, GIIM (pfam08388)

Seq: WGTT01000136.1 (2931 bp)
Overview 1 RT 1: 147-1914 bp Neighborhood of RT #1 [147, 2120] RVT-GII HNHc Feature: gene Location: 147-2120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 483-1221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 483-1221 bp Feature: domain Description: HNHc Note: nucleases Location: 1776-1914 bp Feature: domain Description: HNHc Note: nucleases Location: 1776-1914 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: WGTT01000076.1 (18151 bp)
Overview 1 RT 1: 8511-14878 bp Neighborhood of RT #1 [8511, 14878] dnaG RVT-UG24 Feature: gene Location: 8511-9551 bp Feature: domain Description: dnaG Location: 8595-9537 bp Feature: domain Description: dnaG Location: 8595-9537 bp Feature: gene Location: 9557-10234 bp Feature: gene Location: 10255-13680 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 10768-11233 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 1076 8-11233 bp Feature: gene Location: 13825-14100 bp Feature: gene Location: 14243-14878 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dnaG (TIGR01391), RVT-UG24

Seq: WGTT01000003.1 (142196 bp)
Overview 1 RT 1: 2-2307 bp Neighborhood of RT #1 [2, 2307] RVT-DGRs Feature: gene Location: 2-1390 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 302-899 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 302-899 bp Feature: gene Location: 1390-1875 bp Feature: gene Location: 2065-2307 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs