myRT

myRT report for GCA_014879855.1_ASM1487985v1

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Seq: JACSRH010000180.1 (4448 bp)
Overview 1 RT 1: 256-4135 bp Neighborhood of RT #1 [256, 4356] COG5635 pfam03781 RVT-DGRs Feature: gene Location: 256-3081 bp Feature: domain Description: COG5635 Location: 712-1663 bp Feature: domain Description: COG5635 Location: 71 2-1 663 bp Feature: domain Description: pfam03781 Location: 2152-3070 bp Feature: domain Description: pfam03781 Location: 21 52-3070 bp Feature: gene Location: 3277-4356 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3481-4135 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3481 -41 35 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5635 (Predicted NTPase, NACHT family domain ), pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), RVT-DGRs

Seq: JACSRH010000068.1 (10638 bp)
Overview 1 RT 1: 741-4207 bp Neighborhood of RT #1 [741, 4212] Avd_like RVT-DGRs DegQ Feature: gene Location: 741-896 bp Feature: gene Location: 1087-1428 bp Feature: domain Description: Avd_like Location: 1105-1417 bp Feature: domain Description: Avd_like Location: 1105-1417 bp Feature: gene Location: 1412-2530 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1616-2264 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1616-2 2 64 bp Feature: gene Location: 2547-2882 bp Feature: gene Location: 3352-4212 bp Feature: domain Description: DegQ Location: 3403-4207 bp Feature: domain Description: DegQ Location: 3403-42 07 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, DegQ (pfam08181)

Seq: JACSRH010000383.1 (5799 bp)
Overview 1 RT 1: 1-5760 bp Neighborhood of RT #1 [1, 5798] YceI RVT-DGRs Avd_like NACHT FGE-sulfatase Feature: gene Location: 1-438 bp Feature: domain Description: YceI Location: 16-424 bp Feature: domain Description: YceI Location: 16-424 bp Feature: gene Location: 515-1735 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 881-1529 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 881-1529 bp Feature: gene Location: 1557-1898 bp Feature: domain Description: Avd_like Location: 1575-1887 bp Feature: domain Description: Avd_like Location: 1575-1887 bp Feature: gene Location: 2631-5798 bp Feature: domain Description: NACHT Location: 3429-3996 bp Feature: domain Description: NACHT Location: 3 429-3 996 bp Feature: domain Description: FGE-sulfatase Location: 5067-5760 bp Feature: domain Description: FGE-sulfatase Location: 5067-5760 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YceI (smart00867), RVT-DGRs, Avd_like (cd16376), NACHT (pfam05729), FGE-sulfatase (pfam03781)

Seq: JACSRH010000444.1 (4456 bp)
Overview 1 RT 1: 313-4406 bp Neighborhood of RT #1 [313, 4453] Cas2_I_II_III Cas1_I-II-III RVT-CRISPR cas_cas6 Feature: gene Location: 313-600 bp Feature: domain Description: Cas2_I_II_III Location: 331-553 bp Feature: domain Description: Cas2_I_II_III Location: 331-553 bp Feature: gene Location: 789-1781 bp Feature: domain Description: Cas1_I-II-III Location: 798-1746 bp Feature: domain Description: Cas1_I-II-III Location: 798-174 6 bp Feature: gene Location: 1878-2780 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2076-2670 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2076-2670 bp Feature: gene Location: 2790-3587 bp Feature: gene Location: 3911-4453 bp Feature: domain Description: cas_cas6 Location: 4037-4406 bp Feature: domain Description: cas_cas6 Location: 4 037-4 4 06 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), Cas1_I-II-III (cl00656), RVT-CRISPR, cas_cas6 (TIGR01877)