myRT

myRT report for GCA_014879995.1_ASM1487999v1

Download annotations/find similar RTs

Seq: JADBCK010000047.1 (4367 bp)
Overview 1 RT 1: 2-2973 bp Neighborhood of RT #1 [2, 2973] RVT-Retrons CspC Feature: gene Location: 2-316 bp Feature: gene Location: 950-1132 bp Feature: gene Location: 1154-2293 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1298-1853 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 298-1 853 bp Feature: gene Location: 2298-2501 bp Feature: domain Description: CspC Location: 2301-2496 bp Feature: domain Description: CspC Location: 2301 -2496 bp Feature: gene Location: 2710-2973 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, CspC (COG1278)

Seq: JADBCK010000036.1 (17647 bp)
Overview 1 RT 1: 9256-13698 bp Neighborhood of RT #1 [9256, 13700] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 9256-10527 bp Feature: domain Description: umuC Location: 9259-10519 bp Feature: domain Description: umuC Location: 92 59-10519 bp Feature: gene Location: 10527-11210 bp Feature: domain Description: PRK10276 Location: 10830-11193 bp Feature: domain Description: PRK102 76 Location: 10830-11193 bp Feature: gene Location: 11364-12851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11769-12459 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11769-12 459 bp Feature: gene Location: 13003-13278 bp Feature: domain Description: InsA Location: 13006-13270 bp Feature: domain Description: InsA Location: 13006-132 70 bp Feature: gene Location: 13197-13700 bp Feature: domain Description: DDE_Tnp_IS1 Location: 13308-13698 bp Feature: domain Description: DDE_Tnp_IS1 Location: 13308-13698 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400)

Seq: JADBCK010000004.1 (374758 bp)
Overview 1 RT 1: 23036-27919 bp Neighborhood of RT #1 [23036, 27921] umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 23036-24301 bp Feature: domain Description: umuC Location: 23039-24299 bp Feature: domain Description: umuC Location: 23 03 9-24299 bp Feature: gene Location: 24526-24714 bp Feature: gene Location: 24974-25882 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 25247-25703 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 25247-25703 bp Feature: gene Location: 26083-26751 bp Feature: domain Description: PRK09951 Location: 26086-26749 bp Feature: domain Description: PRK09951 Location: 26086-26749 bp Feature: gene Location: 26956-27921 bp Feature: domain Description: PRK15110 Location: 26959-27919 bp Feature: domain Description: PRK15110 Location: 26959-27919 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)