myRT

myRT report for GCA_014880035.1_ASM1488003v1

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Seq: JADBCL010000009.1 (230690 bp)
Overview 1 RT 1: 23036-27919 bp Neighborhood of RT #1 [23036, 27921] umuC RVT-UG11 PRK09951 PRK15110 Feature: gene Location: 23036-24301 bp Feature: domain Description: umuC Location: 23039-24299 bp Feature: domain Description: umuC Location: 23039-24299 bp Feature: gene Location: 24526-24714 bp Feature: gene Location: 24974-25882 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 25247-25703 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 25247-25703 bp Feature: gene Location: 26083-26751 bp Feature: domain Description: PRK09951 Location: 26086-26749 bp Feature: domain Description: PRK09951 Location: 26086-26749 bp Feature: gene Location: 26956-27921 bp Feature: domain Description: PRK15110 Location: 26959-27919 bp Feature: domain Description: PRK1 51 1 0 Location: 26959-2791 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional), PRK15110 (peptide ABC transporter permease SapB)

Seq: JADBCL010000045.1 (4367 bp)
Overview 1 RT 1: 2-2973 bp Neighborhood of RT #1 [2, 2973] RVT-Retrons CspC Feature: gene Location: 2-316 bp Feature: gene Location: 950-1132 bp Feature: gene Location: 1154-2293 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1298-1853 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 98-1853 bp Feature: gene Location: 2298-2501 bp Feature: domain Description: CspC Location: 2301-2496 bp Feature: domain Description: CspC Location: 2 301-2 496 bp Feature: gene Location: 2710-2973 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, CspC (COG1278)

Seq: JADBCL010000024.1 (95734 bp)
Overview 1 RT 1: 82035-86471 bp Neighborhood of RT #1 [82035, 86479] DDE_Tnp_IS1 InsA RVT-GII PRK10276 umuC Feature: gene Location: 82035-82412 bp Feature: domain Description: DDE_Tnp_IS1 Location: 82038-82410 bp Feature: domain Description: DDE_Tnp_IS1 Location: 8203 8-82410 bp Feature: gene Location: 82457-82732 bp Feature: domain Description: InsA Location: 82460-82724 bp Feature: domain Description: InsA Location: 82460-82724 bp Feature: gene Location: 82884-84371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83289-83979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83 289-83 979 bp Feature: gene Location: 84525-85208 bp Feature: domain Description: PRK10276 Location: 84828-85191 bp Feature: domain Description: PRK10276 Location: 84828-85191 bp Feature: gene Location: 85208-86479 bp Feature: domain Description: umuC Location: 85211-86471 bp Feature: domain Description: umuC Location: 85211-86471 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), InsA (COG3677), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)