myRT

myRT report for GCA_900005125.1_WCU338

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Seq: HG792464.1 (13159 bp)
Overview 1 RT 1: 3900-12720 bp Neighborhood of RT #1 [3900, 12720] rve PinE RVT-GII RVT-GII RVT-GII PRK09870 HTH_29 InsE PHA02517 RVT-GII Feature: gene Location: 3900-4271 bp Feature: domain Description: rve Location: 3918-4254 bp Feature: domain Description: rve Location: 391 8-4254 bp Feature: gene Location: 4387-4986 bp Feature: domain Description: PinE Location: 4390-4942 bp Feature: domain Description: PinE Location: 4390-4942 bp Feature: gene Location: 5564-5932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5756-5927 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5756-5927 bp Feature: gene Location: 5951-6190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5957-6140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5957-61 40 bp Feature: gene Location: 6181-6555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6187-6412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 87-641 2 bp Feature: gene Location: 6757-6972 bp Feature: gene Location: 7554-8075 bp Feature: domain Description: PRK09870 Location: 7560-8058 bp Feature: domain Description: PRK09870 Location: 7560-8058 bp Feature: gene Location: 9221-9388 bp Feature: gene Location: 9658-10899 bp Feature: domain Description: HTH_29 Location: 9664-9760 bp Feature: domain Description: HTH_29 Location: 9664-9760 bp Feature: domain Description: InsE Location: 9943-10210 bp Feature: domain Description: InsE Location: 9943-1 021 0 bp Feature: domain Description: PHA02517 Location: 10330-10876 bp Feature: domain Description: PHA0251 7 Location: 1 0330-1 0876 bp Feature: gene Location: 11031-12158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11304-12015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 304-1 201 5 bp Feature: gene Location: 12298-12507 bp Feature: gene Location: 12571-12720 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve (pfam00665), PinE (COG1961), RVT-GII, PRK09870 (tyrosine recombinase; Provisional), HTH_29 (pfam13551), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed)