myRT

myRT report for GCA_900009265.2_PCC_9631_PRJEB10994_v2

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Seq: LR735021.1 (314135 bp)
Overview 1 RT 1: 105946-113835 bp Neighborhood of RT #1 [105946, 113924] TniQ LexA_DNA_bind LexA_DNA_bind LexA_DNA_bind RVT-GII GIIM McrA DUF3768 RVT_N RVT-GII HNHc nucleoid_noc nucleoid_noc BcsQ Feature: gene Location: 105946-106101 bp Feature: gene Location: 106890-108173 bp Feature: domain Description: TniQ Location: 106941-107133 bp Feature: domain Description: TniQ Location: 1 06941 -1 071 33 bp Feature: domain Description: LexA_DNA_bind Location: 107652-107742 bp Feature: domain Description: LexA_DNA_bind Location: 1 07652-1 07742 bp Feature: domain Description: LexA_DNA_bind Location: 107817-107913 bp Feature: domain Description: LexA_DNA_bind Location: 1 0781 7-1 0791 3 bp Feature: domain Description: LexA_DNA_bind Location: 108030-108093 bp Feature: domain Description: LexA_DNA_bind Location: 1 08030-1 08093 bp Feature: gene Location: 108228-109409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108333-108669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 08333-1 08669 bp Feature: domain Description: GIIM Note: maturase Location: 108768-108969 bp Feature: domain Description: GIIM Note: maturase Location: 1 08768-1 08969 bp Feature: domain Description: McrA Location: 109071-109347 bp Feature: domain Description: McrA Location: 1 09071 -1 09347 bp Feature: gene Location: 109809-110165 bp Feature: domain Description: DUF3768 Location: 109908-110160 bp Feature: domain Description: DUF3768 Location: 1 09908-1 1 01 60 bp Feature: gene Location: 110772-111932 bp Feature: domain Description: RVT_N Location: 110817-111063 bp Feature: domain Description: RVT_N Location: 1 1 081 7-1 1 1 063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 111105-111774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 1 05-1 1 1 774 bp Feature: domain Description: HNHc Note: nucleases Location: 111786-111876 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 1 786-1 1 1 876 bp Feature: gene Location: 112126-113118 bp Feature: domain Description: nucleoid_noc Location: 112219-112534 bp Feature: domain Description: nucleoid_noc Location: 1 1 221 9-1 1 2534 bp Feature: domain Description: nucleoid_noc Location: 112702-112948 bp Feature: domain Description: nucleoid_noc Location: 1 1 2702-1 1 2948 bp Feature: gene Location: 113130-113924 bp Feature: domain Description: BcsQ Location: 113133-113835 bp Feature: domain Description: BcsQ Location: 1 1 31 33-1 1 3835 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LR735026.1 (772122 bp)
Overview 1 RT 1: 145203-154061 bp Neighborhood of RT #1 [145203, 154081] PAP_fibrillin Uma2 RVT_N RVT-GII GIIM McrA PRK07380 TPR_12 TPR_12 TPR_12 CHAT Feature: gene Location: 145203-145796 bp Feature: domain Description: PAP_fibrillin Location: 145218-145782 bp Feature: domain Description: PAP_fibrillin Location: 1452 18-145782 bp Feature: gene Location: 145841-146542 bp Feature: domain Description: Uma2 Location: 145862-146360 bp Feature: domain Description: Uma2 Location: 145862 -146360 bp Feature: gene Location: 147220-148944 bp Feature: domain Description: RVT_N Location: 147262-147508 bp Feature: domain Description: RVT_N Location: 1472 62 -147508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 147550-148219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 147550-1482 19 bp Feature: domain Description: GIIM Note: maturase Location: 148318-148540 bp Feature: domain Description: GIIM Note: maturase Location: 148318-148540 bp Feature: domain Description: McrA Location: 148621-148894 bp Feature: domain Description: McrA Location: 14862 1-148894 bp Feature: gene Location: 149242-150537 bp Feature: domain Description: PRK07380 Location: 149245-150535 bp Feature: domain Description: PRK07380 Location: 1492 45-150535 bp Feature: gene Location: 151352-154081 bp Feature: domain Description: TPR_12 Location: 151634-151832 bp Feature: domain Description: TPR_12 Location: 151634-151832 bp Feature: domain Description: TPR_12 Location: 151874-152078 bp Feature: domain Description: TPR_12 Location: 151874-152 078 bp Feature: domain Description: TPR_12 Location: 152144-152357 bp Feature: domain Description: TPR_12 Location: 152 144-152 357 bp Feature: domain Description: CHAT Location: 153122-154061 bp Feature: domain Description: CHAT Location: 15312 2 -154061 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LR735146.1 (3719 bp)
Overview 1 RT 1: 1-3661 bp Neighborhood of RT #1 [1, 3717] RVT-GII GIIM McrA DUF3768 RVT_N RVT-GII HNHc Feature: gene Location: 1-1194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118-454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118-454 bp Feature: domain Description: GIIM Note: maturase Location: 553-754 bp Feature: domain Description: GIIM Note: maturase Location: 553 -754 bp Feature: domain Description: McrA Location: 856-1132 bp Feature: domain Description: McrA Location: 856-113 2 bp Feature: gene Location: 1594-1950 bp Feature: domain Description: DUF3768 Location: 1693-1945 bp Feature: domain Description: DUF3 768 Location: 1693 -1945 bp Feature: gene Location: 2557-3717 bp Feature: domain Description: RVT_N Location: 2602-2848 bp Feature: domain Description: RVT_N Location: 2602-2848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2890-3559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2890-3 559 bp Feature: domain Description: HNHc Note: nucleases Location: 3571-3661 bp Feature: domain Description: HNHc Note: nucleases Location: 3 571-3 661 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LR734992.1 (225693 bp)
Overview 1 RT 1: 71177-77003 bp Neighborhood of RT #1 [71177, 77047] ParB_N_like_MT RVT_N RVT-GII GIIM HNHc RHH_5 PRK07452 Feature: gene Location: 71177-71605 bp Feature: gene Location: 71821-73098 bp Feature: domain Description: ParB_N_like_MT Location: 71881-72136 bp Feature: domain Description: ParB_N_like_MT Location: 71881-72136 bp Feature: gene Location: 73917-75659 bp Feature: domain Description: RVT_N Location: 73956-74202 bp Feature: domain Description: RVT_N Location: 73956-74 202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74244-74913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74 24 4 -74 913 bp Feature: domain Description: GIIM Note: maturase Location: 75012-75213 bp Feature: domain Description: GIIM Note: maturase Location: 75012-75213 bp Feature: domain Description: HNHc Note: nucleases Location: 75432-75582 bp Feature: domain Description: HNHc Note: nucleases Location: 754 32-75582 bp Feature: gene Location: 75715-75948 bp Feature: domain Description: RHH_5 Location: 75799-75880 bp Feature: domain Description: RHH_5 Location: 75799-75880 bp Feature: gene Location: 76064-77047 bp Feature: domain Description: PRK07452 Location: 76070-77003 bp Feature: domain Description: PRK074 52 Location: 76070-77003 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LR735009.1 (367361 bp)
Overview 1 RT 1: 35460-39760 bp Neighborhood of RT #1 [35460, 39760] KOG4658 RVT_N RVT-GII GIIM HNH Feature: gene Location: 35460-35639 bp Feature: gene Location: 35858-36778 bp Feature: domain Description: KOG4658 Location: 36215-36623 bp Feature: domain Description: KOG465 8 Location: 36215 -36623 bp Feature: gene Location: 36822-38507 bp Feature: domain Description: RVT_N Location: 36858-37104 bp Feature: domain Description: RVT_N Location: 3685 8-37104 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37146-37800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37146-37800 bp Feature: domain Description: GIIM Note: maturase Location: 37902-38133 bp Feature: domain Description: GIIM Note: maturase Location: 37902-38133 bp Feature: domain Description: HNH Note: nucleases Location: 38346-38481 bp Feature: domain Description: HNH Note: nucleases Location: 38346-38481 bp Feature: gene Location: 38794-38937 bp Feature: gene Location: 39113-39760 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LR735018.1 (658797 bp)
Overview 1 RT 1: 209754-217732 bp Neighborhood of RT #1 [209754, 217737] EGL9 RVT_N RVT-GII GIIM McrA RVT_N RVT-GII GIIM McrA NrdF NrdF Feature: gene Location: 209754-210662 bp Feature: domain Description: EGL9 Location: 210063-210654 bp Feature: domain Description: EGL9 Location: 21006 3-2106 54 bp Feature: gene Location: 210737-210910 bp Feature: gene Location: 211199-212917 bp Feature: domain Description: RVT_N Location: 211244-211490 bp Feature: domain Description: RVT_N Location: 211244-211490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 211532-212201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 211532-212201 bp Feature: domain Description: GIIM Note: maturase Location: 212300-212501 bp Feature: domain Description: GIIM Note: maturase Location: 212300-212501 bp Feature: domain Description: McrA Location: 212606-212873 bp Feature: domain Description: McrA Location: 2126 06 -212873 bp Feature: gene Location: 213154-213486 bp Feature: gene Location: 214506-216230 bp Feature: domain Description: RVT_N Location: 214548-214794 bp Feature: domain Description: RVT_N Location: 214548-214794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 214836-215505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 214836 -215505 bp Feature: domain Description: GIIM Note: maturase Location: 215604-215826 bp Feature: domain Description: GIIM Note: maturase Location: 2156 04-215826 bp Feature: domain Description: McrA Location: 215907-216180 bp Feature: domain Description: McrA Location: 215907-216 180 bp Feature: gene Location: 216818-217144 bp Feature: domain Description: NrdF Location: 216824-217124 bp Feature: domain Description: NrdF Location: 216 824-217124 bp Feature: gene Location: 217474-217737 bp Feature: domain Description: NrdF Location: 217591-217732 bp Feature: domain Description: NrdF Location: 217591-217732 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LR734995.1 (3719 bp)
Overview 1 RT 1: 1-3661 bp Neighborhood of RT #1 [1, 3717] RVT-GII GIIM McrA DUF3768 RVT_N RVT-GII HNHc Feature: gene Location: 1-1194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118-454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118-454 bp Feature: domain Description: GIIM Note: maturase Location: 553-754 bp Feature: domain Description: GIIM Note: maturase Location: 553-7 54 bp Feature: domain Description: McrA Location: 856-1132 bp Feature: domain Description: McrA Location: 856-1132 bp Feature: gene Location: 1594-1950 bp Feature: domain Description: DUF3768 Location: 1693-1945 bp Feature: domain Description: DUF37 68 Location: 1693-1945 bp Feature: gene Location: 2557-3717 bp Feature: domain Description: RVT_N Location: 2602-2848 bp Feature: domain Description: RVT_N Location: 2602-2848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2890-3559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2890-3559 bp Feature: domain Description: HNHc Note: nucleases Location: 3571-3661 bp Feature: domain Description: HNHc Note: nucleases Location: 357 1-3661 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LR734981.1 (2329 bp)
Overview 1 RT 1: 603-2277 bp Neighborhood of RT #1 [603, 2327] RVT_N RVT-GII GIIM McrA Feature: gene Location: 603-2327 bp Feature: domain Description: RVT_N Location: 645-891 bp Feature: domain Description: RVT_N Location: 645-8 91 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 933-1602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 933-1602 bp Feature: domain Description: GIIM Note: maturase Location: 1701-1923 bp Feature: domain Description: GIIM Note: maturase Location: 1701-1923 bp Feature: domain Description: McrA Location: 2004-2277 bp Feature: domain Description: McrA Location: 2004-2277 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: LR735042.1 (2329 bp)
Overview 1 RT 1: 603-2277 bp Neighborhood of RT #1 [603, 2327] RVT_N RVT-GII GIIM McrA Feature: gene Location: 603-2327 bp Feature: domain Description: RVT_N Location: 645-891 bp Feature: domain Description: RVT_N Location: 645-89 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 933-1602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9 33-1602 bp Feature: domain Description: GIIM Note: maturase Location: 1701-1923 bp Feature: domain Description: GIIM Note: maturase Location: 1701-19 23 bp Feature: domain Description: McrA Location: 2004-2277 bp Feature: domain Description: McrA Location: 2004-2277 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT