myRT

myRT report for GCA_900010725.1_BBR_PRJEB10992

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Seq: LN886412.1 (5071466 bp)
Overview 1 RT 1: 4860003-4866103 bp Neighborhood of RT #1 [4860003, 4866159] NrdF NrdF RVT_N RVT-GII GIIM McrA NrdF ATP-cone RNR_I Feature: gene Location: 4860003-4860476 bp Feature: domain Description: NrdF Location: 4860012-4860468 bp Feature: domain Description: NrdF Location: 486001 2-4860468 bp Feature: gene Location: 4860757-4861011 bp Feature: domain Description: NrdF Location: 4860763-4861003 bp Feature: domain Description: NrdF Location: 4860763-4861 003 bp Feature: gene Location: 4861067-4862875 bp Feature: domain Description: RVT_N Location: 4861103-4861349 bp Feature: domain Description: RVT_N Location: 4861 1 03-4861 349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4861391-4862066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4861 391 -4862066 bp Feature: domain Description: GIIM Note: maturase Location: 4862168-4862402 bp Feature: domain Description: GIIM Note: maturase Location: 48621 68-4862402 bp Feature: domain Description: McrA Location: 4862495-4862807 bp Feature: domain Description: McrA Location: 4862495-4862807 bp Feature: gene Location: 4863431-4863805 bp Feature: domain Description: NrdF Location: 4863509-4863791 bp Feature: domain Description: NrdF Location: 4863509-4863791 bp Feature: gene Location: 4863883-4866159 bp Feature: domain Description: ATP-cone Location: 4863949-4864201 bp Feature: domain Description: ATP-cone Location: 4863949-4864201 bp Feature: domain Description: RNR_I Location: 4864420-4866103 bp Feature: domain Description: RNR_I Location: 4864420-48661 03 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NrdF (COG0208), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), ATP-cone (pfam03477), RNR_I (cd01679)

Seq: LN886409.1 (3783002 bp)
Overview 1 RT 1: 10962-17192 bp Neighborhood of RT #1 [10962, 17272] VapI RelE RVT-AbiP2 GT4-like FAAL Feature: gene Location: 10962-11276 bp Feature: domain Description: VapI Location: 10971-11238 bp Feature: domain Description: VapI Location: 10971-112 38 bp Feature: gene Location: 11442-11783 bp Feature: domain Description: RelE Location: 11445-11694 bp Feature: domain Description: RelE Location: 11445-11694 bp Feature: gene Location: 12314-13840 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 12764-13220 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 12 764-132 2 0 bp Feature: gene Location: 14214-15449 bp Feature: domain Description: GT4-like Location: 14220-15411 bp Feature: domain Description: GT4-like Location: 142 2 0-15411 bp Feature: gene Location: 15500-17272 bp Feature: domain Description: FAAL Location: 15539-17192 bp Feature: domain Description: FAAL Location: 15539-17192 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VapI (COG3093), RelE (pfam06296), RVT-AbiP2, GT4-like (cd05844), FAAL (cd05931)

Seq: LN886398.1 (2424699 bp)
Overview 1 RT 1: 72318-75472 bp Neighborhood of RT #1 [72318, 75472] TPR_19 PRK07459 RVT_N RVT-GII GIIM McrA Feature: gene Location: 72318-72842 bp Feature: domain Description: TPR_19 Location: 72375-72546 bp Feature: domain Description: TPR_19 Location: 723 75-72546 bp Feature: gene Location: 72855-72998 bp Feature: domain Description: PRK07459 Location: 72861-72972 bp Feature: domain Description: PRK07459 Location: 72861-72972 bp Feature: gene Location: 73247-74935 bp Feature: domain Description: RVT_N Location: 73280-73526 bp Feature: domain Description: RVT_N Location: 73 280-73 526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73568-74234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73 568-7423 4 bp Feature: domain Description: GIIM Note: maturase Location: 74336-74573 bp Feature: domain Description: GIIM Note: maturase Location: 743 3 6-74573 bp Feature: domain Description: McrA Location: 74639-74915 bp Feature: domain Description: McrA Location: 7463 9-74915 bp Feature: gene Location: 75230-75472 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR_19 (pfam14559), PRK07459 (single-stranded DNA-binding protein; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: LN886404.1 (3314393 bp)
Overview 1 RT 1: 3254839-3262734 bp Neighborhood of RT #1 [3254839, 3262734] PRK09256 YhdJ YhdJ RVT_N RVT-GII GIIM M32_Taq Feature: gene Location: 3254839-3255255 bp Feature: domain Description: PRK09256 Location: 3254842-3255244 bp Feature: domain Description: PRK09256 Location: 3254 84 2-325524 4 bp Feature: gene Location: 3255589-3256671 bp Feature: domain Description: YhdJ Location: 3255928-3256042 bp Feature: domain Description: YhdJ Location: 3255928-325604 2 bp Feature: domain Description: YhdJ Location: 3256384-3256642 bp Feature: domain Description: YhdJ Location: 3256384 -325664 2 bp Feature: gene Location: 3257192-3258805 bp Feature: domain Description: RVT_N Location: 3257225-3257471 bp Feature: domain Description: RVT_N Location: 3257225-32574 71 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3257513-3258185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3257513-3258185 bp Feature: domain Description: GIIM Note: maturase Location: 3258290-3258518 bp Feature: domain Description: GIIM Note: maturase Location: 3258290-3258518 bp Feature: gene Location: 3260016-3261545 bp Feature: domain Description: M32_Taq Location: 3260070-3261522 bp Feature: domain Description: M32_Taq Location: 3260070-3261522 bp Feature: gene Location: 3262006-3262734 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09256 (aminoacyl-tRNA hydrolase), YhdJ (COG0863), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), M32_Taq (cd06460)

Seq: LN886377.1 (343462 bp)
Overview 1 RT 1: 177220-182939 bp Neighborhood of RT #1 [177220, 182965] PRK05402 GST_C_family RVT_N RVT-GII GIIM McrA GstA Feature: gene Location: 177220-179538 bp Feature: domain Description: PRK05402 Location: 177238-179476 bp Feature: domain Description: PRK05 402 Location: 177238-179476 bp Feature: gene Location: 179826-180092 bp Feature: domain Description: GST_C_family Location: 179847-180021 bp Feature: domain Description: GST_C_family Location: 179847-180021 bp Feature: gene Location: 180266-181984 bp Feature: domain Description: RVT_N Location: 180308-180554 bp Feature: domain Description: RVT_N Location: 180308-1805 5 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 180599-181268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1805 99-181268 bp Feature: domain Description: GIIM Note: maturase Location: 181367-181568 bp Feature: domain Description: GIIM Note: maturase Location: 181367-1815 68 bp Feature: domain Description: McrA Location: 181670-181946 bp Feature: domain Description: McrA Location: 181670-181946 bp Feature: gene Location: 182253-182474 bp Feature: gene Location: 182567-182965 bp Feature: domain Description: GstA Location: 182609-182939 bp Feature: domain Description: GstA Location: 182609-182939 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05402 (1,4-alpha-glucan branching protein GlgB), GST_C_family (cl02776), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), GstA (COG0625)