myRT

myRT report for GCA_900010755.1_Pseudoclavibacter_helvolus_strain_W3

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Seq: CZJT01000051.1 (6443 bp)
Overview 1 RT 1: 164-5341 bp Neighborhood of RT #1 [164, 5341] L1-EN RVT-UNC DUF1725 Tnp_22_trimer Transposase_22 Tnp_22_dsRBD Feature: gene Location: 164-3904 bp Feature: domain Description: L1-EN Location: 200-788 bp Feature: domain Description: L1 -EN Location: 200-788 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1661-2318 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1 661 -231 8 bp Feature: domain Description: DUF1725 Location: 3803-3857 bp Feature: domain Description: DUF1 725 Location: 3803-3857 bp Feature: gene Location: 4054-4800 bp Feature: domain Description: Tnp_22_trimer Location: 4114-4240 bp Feature: domain Description: Tnp_22_trimer Location: 41 1 4-4240 bp Feature: domain Description: Transposase_22 Location: 4249-4540 bp Feature: domain Description: Transposase_22 Location: 4249-4540 bp Feature: domain Description: Tnp_22_dsRBD Location: 4549-4741 bp Feature: domain Description: Tnp_22_dsRBD Location: 4549-4741 bp Feature: gene Location: 5072-5341 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L1-EN (cd09076), RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC), DUF1725 (pfam08333), Tnp_22_trimer (pfam17489), Transposase_22 (pfam02994), Tnp_22_dsRBD (pfam17490)

Seq: CZJT01000056.1 (265904 bp)
Overview 1 RT 1: 36598-42782 bp Neighborhood of RT #1 [36598, 44488] RarD PLN02852 RVT-Retrons RpoE zf-HC2 Feature: gene Location: 36598-37626 bp Feature: domain Description: RarD Location: 36661-37534 bp Feature: domain Description: RarD Location: 36661-37534 bp Feature: gene Location: 37971-39368 bp Feature: domain Description: PLN02852 Location: 37980-39360 bp Feature: domain Description: PLN02 852 Location: 37980-39360 bp Feature: gene Location: 39699-41084 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40233-40857 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 402 33-40857 bp Feature: gene Location: 41162-41908 bp Feature: gene Location: 42089-44488 bp Feature: domain Description: RpoE Location: 42155-42641 bp Feature: domain Description: RpoE Location: 42 155-42 641 bp Feature: domain Description: zf-HC2 Location: 42683-42782 bp Feature: domain Description: zf-HC2 Location: 42 683-42 782 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RarD (COG2962), PLN02852 (ferredoxin-NADP+ reductase), RVT-Retrons, RpoE (COG3343), zf-HC2 (pfam13490)