myRT

myRT report for GCA_900011805.1_Peptoclostridium_difficile

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Seq: CZXC01000005.1 (174832 bp)
Overview 1 RT 1: 171691-174803 bp Neighborhood of RT #1 [171691, 174829] AcrR TetR_C_33 TpcC RVT-GII Intron_maturas2 HNHc Feature: gene Location: 171691-172248 bp Feature: domain Description: AcrR Location: 171700-171901 bp Feature: domain Description: AcrR Location: 1 71 700-1 71 901 bp Feature: domain Description: TetR_C_33 Location: 171946-172189 bp Feature: domain Description: TetR_C_33 Location: 1 71 946-1 721 89 bp Feature: gene Location: 172295-173206 bp Feature: domain Description: TpcC Location: 172529-173198 bp Feature: domain Description: TpcC Location: 1 72529-1 731 98 bp Feature: gene Location: 173450-174829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 173453-174110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 73453-1 741 1 0 bp Feature: domain Description: Intron_maturas2 Location: 174176-174524 bp Feature: domain Description: Intron_maturas2 Location: 1 741 76-1 74524 bp Feature: domain Description: HNHc Note: nucleases Location: 174647-174803 bp Feature: domain Description: HNHc Note: nucleases Location: 1 74647-1 74803 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CZXC01000003.1 (198754 bp)
Overview 1 RT 1: 185613-191395 bp Neighborhood of RT #1 [185613, 191409] HTH_XRE Rol_Rep_N Rep_trans DUF3789 RVT-GII HNHc PldB Hydrolase_4 ArdA Feature: gene Location: 185613-186785 bp Feature: domain Description: HTH_XRE Location: 185619-185754 bp Feature: domain Description: HTH_XRE Location: 185619-185754 bp Feature: domain Description: Rol_Rep_N Location: 185793-186054 bp Feature: domain Description: Rol_Rep_N Location: 185793-186054 bp Feature: domain Description: Rep_trans Location: 186078-186693 bp Feature: domain Description: Rep_trans Location: 186078-186693 bp Feature: gene Location: 186793-186927 bp Feature: domain Description: DUF3789 Location: 186805-186898 bp Feature: domain Description: DUF3789 Location: 186805-186898 bp Feature: gene Location: 187669-189579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 188002-188740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 188002 -188740 bp Feature: domain Description: HNHc Note: nucleases Location: 189295-189460 bp Feature: domain Description: HNHc Note: nucleases Location: 1892 95-189460 bp Feature: gene Location: 189944-190594 bp Feature: domain Description: PldB Location: 190160-190277 bp Feature: domain Description: PldB Location: 190160-1902 77 bp Feature: domain Description: Hydrolase_4 Location: 190283-190550 bp Feature: domain Description: Hydrolase_4 Location: 1902 83-190550 bp Feature: gene Location: 190927-191409 bp Feature: domain Description: ArdA Location: 190966-191395 bp Feature: domain Description: ArdA Location: 190966-191395 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CZXC01000128.1 (370 bp)
Overview 1 RT 1: 1-370 bp Neighborhood of RT #1 [1, 369] RVT-GII Feature: gene Location: 1-369 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 169-370 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 169-3 70 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT