myRT

myRT report for GCA_900013505.1_AHY_PRJEB12192_v1

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Seq: LT009746.1 (2049892 bp)
Overview 1 RT 1: 863108-869252 bp Neighborhood of RT #1 [863108, 869317] Phage_integrase RVT-UG2 Phage_int_SAM_5 INT_C_like_1 Feature: gene Location: 863108-863677 bp Feature: domain Description: Phage_integrase Location: 863141-863627 bp Feature: domain Description: Phage_integrase Location: 8631 41 -863627 bp Feature: gene Location: 864175-864840 bp Feature: gene Location: 865380-866816 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 865557-866472 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 865557-866472 bp Feature: gene Location: 866857-867438 bp Feature: gene Location: 867980-869317 bp Feature: domain Description: Phage_int_SAM_5 Location: 868472-868685 bp Feature: domain Description: Phage_int_SAM_5 Location: 868472-868685 bp Feature: domain Description: INT_C_like_1 Location: 868865-869252 bp Feature: domain Description: INT_C_like_1 Location: 868865-869252 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG2, Phage_int_SAM_5 (pfam13102), INT_C_like_1 (cd01184)

Seq: LT009747.1 (337651 bp)
Overview 1 RT 1: 183167-190630 bp Neighborhood of RT #1 [183167, 192309] TylF aGPT-Pplase1 RVT-Retrons TIR_2 Patatin_and_cPLA2 HATPase_c_3 Feature: gene Location: 183167-184117 bp Feature: domain Description: TylF Location: 183572-184064 bp Feature: domain Description: TylF Location: 183572 -184064 bp Feature: gene Location: 184114-185223 bp Feature: domain Description: aGPT-Pplase1 Location: 184174-185011 bp Feature: domain Description: aGPT-Pplase1 Location: 184174-185011 bp Feature: gene Location: 185518-187050 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 185701-186310 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 185701-186310 bp Feature: domain Description: TIR_2 Location: 186616-186949 bp Feature: domain Description: TIR_2 Location: 186616-186949 bp Feature: gene Location: 187376-190042 bp Feature: domain Description: Patatin_and_cPLA2 Location: 188105-188261 bp Feature: domain Description: Patatin_and_cPLA2 Location: 188105-1882 61 bp Feature: gene Location: 190246-192309 bp Feature: domain Description: HATPase_c_3 Location: 190348-190630 bp Feature: domain Description: HATPase_c_3 Location: 190348-190630 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TylF (pfam05711), aGPT-Pplase1 (pfam18723), RVT-Retrons, TIR_2 (pfam13676), Patatin_and_cPLA2 (cl11396), HATPase_c_3 (pfam13589)