myRT

myRT report for GCA_900014905.1_Peptoclostridium_difficile

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Seq: FABQ01000650.1 (549 bp)
Overview 1 RT 1: 2-495 bp Neighborhood of RT #1 [2, 548] RT_nLTR_like RVT-CRISPR-like Feature: gene Location: 2-244 bp Feature: domain Description: RT_nLTR_like Location: 65-221 bp Feature: domain Description: RT_nLTR_like Location: 65-221 bp Feature: gene Location: 180-548 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 318-495 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 31 8-495 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FABQ01000035.1 (22238 bp)
Overview 1 RT 1: 15118-20055 bp Neighborhood of RT #1 [15118, 20099] HTH_XRE Rol_Rep_N Rep_trans DUF3789 RVT-GII HNHc PldB Hydrolase_4 Feature: gene Location: 15118-16290 bp Feature: domain Description: HTH_XRE Location: 15124-15259 bp Feature: domain Description: HTH_XRE Location: 1512 4-152 59 bp Feature: domain Description: Rol_Rep_N Location: 15298-15559 bp Feature: domain Description: Rol_Rep_N Location: 152 98-15559 bp Feature: domain Description: Rep_trans Location: 15583-16198 bp Feature: domain Description: Rep_trans Location: 15583-16198 bp Feature: gene Location: 16298-16432 bp Feature: domain Description: DUF3789 Location: 16310-16403 bp Feature: domain Description: DUF3789 Location: 16310-16403 bp Feature: gene Location: 17174-19084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17507-18245 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17507-182 45 bp Feature: domain Description: HNHc Note: nucleases Location: 18800-18965 bp Feature: domain Description: HNHc Note: nucleases Location: 18800-18965 bp Feature: gene Location: 19251-19412 bp Feature: gene Location: 19449-20099 bp Feature: domain Description: PldB Location: 19665-19782 bp Feature: domain Description: PldB Location: 19665-19782 bp Feature: domain Description: Hydrolase_4 Location: 19788-20055 bp Feature: domain Description: Hydrolase_4 Location: 19788-2 0055 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: FABQ01000449.1 (1865 bp)
Overview 1 RT 1: 1-1483 bp Neighborhood of RT #1 [1, 1686] RVT-GII Intron_maturas2 Feature: gene Location: 1-1686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 268-1078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 268-1078 bp Feature: domain Description: Intron_maturas2 Location: 1144-1483 bp Feature: domain Description: Intron_maturas2 Location: 1144-1483 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT