myRT

myRT report for GCA_900042795.1_F1L3

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Seq: FCPC01000012.1 (182286 bp)
Overview 1 RT 1: 47695-51577 bp Neighborhood of RT #1 [47695, 51582] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 47695-48153 bp Feature: domain Description: dut Location: 47701-48148 bp Feature: domain Description: dut Location: 47701 -481 48 bp Feature: gene Location: 48260-48856 bp Feature: domain Description: slmA Location: 48266-48842 bp Feature: domain Description: slmA Location: 48266-48842 bp Feature: gene Location: 48902-49861 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 49037-49586 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 49037-49586 bp Feature: gene Location: 50159-50815 bp Feature: domain Description: pyrE Location: 50177-50810 bp Feature: domain Description: pyrE Location: 501 77-5081 0 bp Feature: gene Location: 50866-51582 bp Feature: domain Description: rph Location: 50869-51577 bp Feature: domain Description: rph Location: 50869-51 577 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: FCPC01000008.1 (258320 bp)
Overview 1 RT 1: 121401-127009 bp Neighborhood of RT #1 [121401, 127014] DUF5405 Phage_GPA RVT-AbiP2 Q Feature: gene Location: 121401-121676 bp Feature: domain Description: DUF5405 Location: 121419-121659 bp Feature: domain Description: DUF5405 Location: 12 1419-12 1659 bp Feature: gene Location: 121666-123951 bp Feature: domain Description: Phage_GPA Location: 122065-123052 bp Feature: domain Description: Phage_GPA Location: 12 2 065-12 3052 bp Feature: gene Location: 124055-125767 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 124637-125090 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 12 4637-12 5090 bp Feature: gene Location: 125780-125941 bp Feature: gene Location: 125980-127014 bp Feature: domain Description: Q Location: 125983-127009 bp Feature: domain Description: Q Location: 12 5983-12 7009 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5405 (pfam17399), Phage_GPA (pfam05840), RVT-AbiP2, Q (PHA02536)

Seq: FCPC01000031.1 (40702 bp)
Overview 1 RT 1: 27041-32289 bp Neighborhood of RT #1 [27041, 32289] PRK11578 RVT-GII GIIM PHA02517 Feature: gene Location: 27041-28228 bp Feature: domain Description: PRK11578 Location: 27086-28187 bp Feature: domain Description: PRK11578 Location: 27086-28187 bp Feature: gene Location: 29122-29265 bp Feature: gene Location: 29857-31380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30130-30862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 013 0-3 0862 bp Feature: domain Description: GIIM Note: maturase Location: 30937-31135 bp Feature: domain Description: GIIM Note: maturase Location: 3 093 7-3 113 5 bp Feature: gene Location: 31545-31949 bp Feature: domain Description: PHA02517 Location: 31548-31929 bp Feature: domain Description: PHA02517 Location: 3 1548-3 1929 bp Feature: gene Location: 32032-32289 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11578 (macrolide transporter subunit MacA; Provisional), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)