myRT

myRT report for GCA_900050175.1_10771_1_21

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Seq: FJBF01000006.1 (151467 bp)
Overview 1 RT 1: 1580-8114 bp Neighborhood of RT #1 [1580, 8206] DUF4160 RVT-GII DUF4158 DDE_Tnp_Tn3 Feature: gene Location: 1580-1840 bp Feature: domain Description: DUF4160 Location: 1607-1790 bp Feature: domain Description: DUF41 60 Location: 1 607-1 790 bp Feature: gene Location: 2122-3174 bp Feature: gene Location: 3892-4314 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4153-4276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 53-4276 bp Feature: gene Location: 4528-4743 bp Feature: gene Location: 5159-8206 bp Feature: domain Description: DUF4158 Location: 5186-5675 bp Feature: domain Description: DUF41 58 Location: 51 86-5675 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 6938-8114 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 6938-81 1 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4160 (pfam13711), RVT-GII, DUF4158 (pfam13700), DDE_Tnp_Tn3 (pfam01526)

Seq: FJBF01000016.1 (80710 bp)
Overview 1 RT 1: 21080-27000 bp Neighborhood of RT #1 [21080, 27074] DUF5338 RVT-UG5 Arm-DNA-bind_3 INT_P4_C Feature: gene Location: 21080-21352 bp Feature: gene Location: 21680-22045 bp Feature: domain Description: DUF5338 Location: 21689-21896 bp Feature: domain Description: DUF5338 Location: 2 1689-2 1896 bp Feature: gene Location: 22350-25439 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 22860-23388 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 2 860-2 3388 bp Feature: gene Location: 25536-25706 bp Feature: gene Location: 25812-27074 bp Feature: domain Description: Arm-DNA-bind_3 Location: 25863-26115 bp Feature: domain Description: Arm-DNA-bind_3 Location: 2 5863-2 6115 bp Feature: domain Description: INT_P4_C Location: 26469-27000 bp Feature: domain Description: INT_P4_C Location: 2 6469-2 7000 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5338 (pfam17273), RVT-UG5, Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801)