myRT

myRT report for GCA_900051665.1_10771_1_40

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Seq: FJAV01000004.1 Legionella pneumophila strain 2531STDY5467321 genome assembly, contig: ERS225363SCcontig000004, whole genome shotgun sequence (305132 bp)
Overview 1 RT 1: 45921-50222 bp Neighborhood of RT #1 [45921, 50314] COG3547 PHA02517 RVT-GII RVT_1 GIIM InsE HTH_23 HTH_33 Feature: gene Location: 45921-46958 bp Feature: domain Description: COG3547 Location: 45939-46905 bp Feature: domain Description: COG3547 Location: 45939-46905 bp Feature: gene Location: 47317-47574 bp Feature: domain Description: PHA02517 Location: 47320-47536 bp Feature: domain Description: PHA0251 7 Location: 47320-47536 bp Feature: gene Location: 47680-48834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47884-48082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47884-48082 bp Feature: domain Description: RVT_1 Location: 48136-48454 bp Feature: domain Description: RVT_1 Location: 481 36-48454 bp Feature: domain Description: GIIM Note: maturase Location: 48532-48751 bp Feature: domain Description: GIIM Note: maturase Location: 48532-48751 bp Feature: gene Location: 49371-49664 bp Feature: domain Description: InsE Location: 49380-49644 bp Feature: domain Description: InsE Location: 49380-49644 bp Feature: gene Location: 49754-50314 bp Feature: domain Description: HTH_23 Location: 49841-49964 bp Feature: domain Description: HTH_23 Location: 49841 -49964 bp Feature: domain Description: HTH_33 Location: 50057-50222 bp Feature: domain Description: HTH_33 Location: 50057-50222 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, RVT_1 (pfam00078), GIIM (pfam08388), InsE (COG2963), HTH_23 (pfam13384), HTH_33 (pfam13592)

Seq: FJAV01000011.1 Legionella pneumophila strain 2531STDY5467321 genome assembly, contig: ERS225363SCcontig000011, whole genome shotgun sequence (139350 bp)
Overview 1 RT 1: 47217-52150 bp Neighborhood of RT #1 [47217, 52164] Tra_M RVT_N RVT-GII GIIM Tnp_DNA_bind DDE_Tnp_1 Dimer_Tnp_Tn5 NTP-PPase_MazG_Cterm Feature: gene Location: 47217-47591 bp Feature: domain Description: Tra_M Location: 47265-47460 bp Feature: domain Description: Tra_M Location: 472 65-47460 bp Feature: gene Location: 48051-48203 bp Feature: gene Location: 48439-49959 bp Feature: domain Description: RVT_N Location: 48496-48739 bp Feature: domain Description: RVT_N Location: 48496-48739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48784-49408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48784-49408 bp Feature: domain Description: GIIM Note: maturase Location: 49459-49693 bp Feature: domain Description: GIIM Note: maturase Location: 49459-49693 bp Feature: gene Location: 50030-51481 bp Feature: domain Description: Tnp_DNA_bind Location: 50069-50237 bp Feature: domain Description: Tnp_DNA_bind Location: 50069-502 37 bp Feature: domain Description: DDE_Tnp_1 Location: 50894-51188 bp Feature: domain Description: DDE_Tnp_1 Location: 50894-51188 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 51194-51473 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 51194-51473 bp Feature: gene Location: 51787-52164 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 51814-52150 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 51814-52 150 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra_M (pfam05261), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Tnp_DNA_bind (pfam14706), DDE_Tnp_1 (pfam01609), Dimer_Tnp_Tn5 (pfam02281), NTP-PPase_MazG_Cterm (cd11529)

Seq: FJAV01000016.1 Legionella pneumophila strain 2531STDY5467321 genome assembly, contig: ERS225363SCcontig000016, whole genome shotgun sequence (39138 bp)
Overview 1 RT 1: 93-4192 bp Neighborhood of RT #1 [93, 4192] RVT-UG18 Feature: gene Location: 93-1424 bp Feature: gene Location: 1578-1880 bp Feature: gene Location: 1902-2267 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 1905-2265 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 1905-2265 bp Feature: gene Location: 2765-3778 bp Feature: gene Location: 4049-4192 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG18