myRT

myRT report for GCA_900053695.1_10771_1_16

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Seq: FJBH01000015.1 (80707 bp)
Overview 1 RT 1: 21080-27000 bp Neighborhood of RT #1 [21080, 27074] DUF5338 RVT-UG5 Arm-DNA-bind_3 INT_P4_C Feature: gene Location: 21080-21352 bp Feature: gene Location: 21680-22045 bp Feature: domain Description: DUF5338 Location: 21689-21896 bp Feature: domain Description: DUF5338 Location: 21 689-21 896 bp Feature: gene Location: 22350-25439 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 22860-23388 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 22860-23388 bp Feature: gene Location: 25536-25706 bp Feature: gene Location: 25812-27074 bp Feature: domain Description: Arm-DNA-bind_3 Location: 25863-26115 bp Feature: domain Description: Arm-DNA-bind_3 Location: 25863-261 1 5 bp Feature: domain Description: INT_P4_C Location: 26469-27000 bp Feature: domain Description: INT_P4_C Location: 26469-27000 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5338 (pfam17273), RVT-UG5, Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801)

Seq: FJBH01000006.1 (151451 bp)
Overview 1 RT 1: 1571-8105 bp Neighborhood of RT #1 [1571, 8197] DUF4160 RVT-GII DUF4158 DDE_Tnp_Tn3 Feature: gene Location: 1571-1831 bp Feature: domain Description: DUF4160 Location: 1598-1781 bp Feature: domain Description: DUF4160 Location: 1598-1781 bp Feature: gene Location: 2113-3165 bp Feature: gene Location: 3883-4305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4144-4267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4144-42 67 bp Feature: gene Location: 4519-4734 bp Feature: gene Location: 5150-8197 bp Feature: domain Description: DUF4158 Location: 5177-5666 bp Feature: domain Description: DUF4158 Location: 5177-5666 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 6929-8105 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 692 9-8105 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4160 (pfam13711), RVT-GII, DUF4158 (pfam13700), DDE_Tnp_Tn3 (pfam01526)