myRT

myRT report for GCA_900057045.1_7114_5_80

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Seq: FIIE01000004.1 (148985 bp)
Overview 1 RT 1: 46704-55239 bp Neighborhood of RT #1 [46704, 55382] TnpV SF2_C_SNF RVT-GII Intron_maturas2 HNHc KOG4768 N6_Mtase COG4646 Feature: gene Location: 46704-47078 bp Feature: domain Description: TnpV Location: 46740-47070 bp Feature: domain Description: TnpV Location: 46740-47070 bp Feature: gene Location: 47059-47526 bp Feature: domain Description: SF2_C_SNF Location: 47302-47449 bp Feature: domain Description: SF2_C_SNF Location: 47302-47449 bp Feature: gene Location: 47664-49244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47727-48519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47727-4851 9 bp Feature: domain Description: Intron_maturas2 Location: 48624-48855 bp Feature: domain Description: Intron_maturas2 Location: 48624-48855 bp Feature: domain Description: HNHc Note: nucleases Location: 49020-49206 bp Feature: domain Description: HNHc Note: nucleases Location: 49020-49206 bp Feature: gene Location: 49234-49443 bp Feature: domain Description: KOG4768 Location: 49282-49423 bp Feature: domain Description: KOG4768 Location: 49282-49423 bp Feature: gene Location: 49941-55382 bp Feature: domain Description: N6_Mtase Location: 51933-52524 bp Feature: domain Description: N6_Mtase Location: 51 933-52524 bp Feature: domain Description: COG4646 Location: 53115-55239 bp Feature: domain Description: COG4646 Location: 531 1 5-55239 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpV (pfam14198), SF2_C_SNF (cd18793), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), KOG4768 (KOG4768, Mitochondrial mRNA maturase ), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )

Seq: FIIE01000014.1 (68837 bp)
Overview 1 RT 1: 19497-25342 bp Neighborhood of RT #1 [19497, 25362] PurE PRK06019 RVT-AbiK Adenylsuccinate_lyase_1 CcmA Feature: gene Location: 19497-19985 bp Feature: domain Description: PurE Location: 19509-19971 bp Feature: domain Description: PurE Location: 19509-19971 bp Feature: gene Location: 19972-21045 bp Feature: domain Description: PRK06019 Location: 19981-21034 bp Feature: domain Description: PRK06019 Location: 19981-2 1034 bp Feature: gene Location: 21072-22823 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 21528-21927 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 2 152 8-2 192 7 bp Feature: gene Location: 22795-24135 bp Feature: domain Description: Adenylsuccinate_lyase_1 Location: 22855-24124 bp Feature: domain Description: Adenylsuccinate_lyase_1 Location: 2 2 855-2 412 4 bp Feature: gene Location: 24538-25362 bp Feature: domain Description: CcmA Location: 24544-25342 bp Feature: domain Description: CcmA Location: 2 4544-2 5342 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PurE (COG0041), PRK06019 (phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed), RVT-AbiK, Adenylsuccinate_lyase_1 (cd01360), CcmA (COG4133)

Seq: FIIE01000035.1 (1860 bp)
Overview 1 RT 1: 66-1858 bp Neighborhood of RT #1 [66, 1858] RVT-GII GIIM Feature: gene Location: 66-1343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 270-885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 270-885 bp Feature: domain Description: GIIM Note: maturase Location: 939-1152 bp Feature: domain Description: GIIM Note: maturase Location: 93 9-1152 bp Feature: gene Location: 1709-1858 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)